RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 PLEKHG2Q9H7P9 1386 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 ELP1O95163 1332 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 ACEP12821 1306 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 MAP3K19Q56UN5 1328 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 RAD50Q92878 1312 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 PRICKLE3O43900 615 aaPredicted RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 CST3P01034 146 aaPredicted RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 GRK4P32298 578 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 UBE2HP62256 183 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 SRSF3P84103 164 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 SLBPQ14493 270 aaKnown RBP eCLIP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 RRS1Q15050 365 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 MTHFSDQ2M296 383 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 KRT24Q2M2I5 525 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 MCM10Q7L590 875 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 USP48Q86UV5 1035 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 AEBP1Q8IUX7 1158 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 LSG1Q9H089 658 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 FBRSQ9HAH7 460 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 SIRT5Q9NXA8 310 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 BTG4Q9NY30 223 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 LIMCH1Q9UPQ0 1083 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 ATP6V1DQ9Y5K8 247 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 AK5Q9Y6K8 562 aa4.29□□□□□ -1.72
CSMD2-208ENST00000471438 DDX60Q8IY21 1712 aaKnown RBP4.29□□□□□ -1.72
CSMD2-208ENST00000471438 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 ROBO2Q9HCK4 1378 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 HEG1Q9ULI3 1381 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 SCN11AQ9UI33 1791 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 SZT2Q5T011 3432 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 PNMA6EA0A0J9YXQ4 647 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 OR14I1A6ND48 311 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 CTIFO43310 598 aaKnown RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 CAVIN2O95810 425 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 ZGLP1P0C6A0 271 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 NCLP19338 710 aaKnown RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 ETV3P41162 512 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 MAGEA10P43363 369 aaPredicted RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 KIR3DL1P43629 444 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 PDE4BQ07343 736 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 TNK2Q07912 1038 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 KIAA2012Q0VF49 1180 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 NOLC1Q14978 699 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 NECTIN1Q15223 517 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 NR0B2Q15466 257 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 TAF7Q15545 349 aaPredicted RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 EAPPQ56P03 285 aaPredicted RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 HSP90AB4PQ58FF6 505 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 HSP90AB2PQ58FF8 381 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 VPS53Q5VIR6 699 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 PRAMEF13Q5VWM6 474 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 CNKSR3Q6P9H4 555 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 PPP1R13LQ8WUF5 828 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 RTF1Q92541 710 aaKnown RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 PKNOX2Q96KN3 472 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 STK31Q9BXU1 1019 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 MIR1-1HGQ9H1L0 117 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 WDR26Q9H7D7 661 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 EPB41L4AQ9HCS5 686 aaPredicted RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 KCND1Q9NSA2 647 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 HYPKQ9NX55 129 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 GPR160Q9UJ42 338 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 HDAC5Q9UQL6 1122 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 R3HCC1Q9Y3T6 440 aaKnown RBP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 TBX22Q9Y458 520 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 SNX14Q9Y5W7 946 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSMD2-208ENST00000471438 MRC1P22897 1456 aa4.28□□□□□ -1.72
CSMD2-208ENST00000471438 COL14A1Q05707 1796 aaKnown RBP4.27□□□□□ -1.73
CSMD2-208ENST00000471438 UTYO14607 1347 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 NFAT5O94916 1531 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 ABCC6O95255 1503 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 UQCRHLA0A096LP55 91 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 N4BP3O15049 544 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 STX6O43752 255 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 F13A1P00488 732 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 UQCRHP07919 91 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 SYT1P21579 422 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 CDK8P49336 464 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 EPHB3P54753 998 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 MAP2K1Q02750 393 aaPredicted RBP4.27□□□□□ -1.73
CSMD2-208ENST00000471438 SNX17Q15036 470 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 MAP3K11Q16584 847 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 NKG7Q16617 165 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 TXNRD1Q16881 649 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 TSNAXIP1Q2TAA8 658 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 SLC6A19Q695T7 634 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 AGMOQ6ZNB7 445 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 RUFY3Q7L099 469 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.27□□□□□ -1.73
CSMD2-208ENST00000471438 FBXO33Q7Z6M2 555 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 LINC01356Q8N9X3 169 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 RGS22Q8NE09 1264 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 IL17REQ8NFR9 667 aa4.27□□□□□ -1.73
CSMD2-208ENST00000471438 XAGE3Q8WTP9 111 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms