RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 TLR3O15455 904 aaKnown RBP20.08■□□□□ 0.81
VPS72-204ENST00000471423 B4GALT4O60513 344 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 CCNE2O96020 404 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 GCFC2P16383 781 aaKnown RBP20.08■□□□□ 0.81
VPS72-204ENST00000471423 GNL2Q13823 731 aaKnown RBP20.08■□□□□ 0.81
VPS72-204ENST00000471423 PPP4R3AQ6IN85 833 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 GJA10Q969M2 543 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 TRPV6Q9H1D0 765 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 PRKAG2Q9UGJ0 569 aa20.08■□□□□ 0.81
VPS72-204ENST00000471423 H3BRB1 525 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 CD4P01730 458 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 PRPF38BQ5VTL8 546 aaKnown RBP20.07■□□□□ 0.8
VPS72-204ENST00000471423 HSCBQ8IWL3 235 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 ETNPPLQ8TBG4 499 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 SLC5A5Q92911 643 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
VPS72-204ENST00000471423 TUT1Q9H6E5 874 aaKnown RBP20.07■□□□□ 0.8
VPS72-204ENST00000471423 TRMT13Q9NUP7 481 aaKnown RBP20.07■□□□□ 0.8
VPS72-204ENST00000471423 TMEM39AQ9NV64 488 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 TCEAL9Q9UHQ7 104 aa20.07■□□□□ 0.8
VPS72-204ENST00000471423 ZNF215Q9UL58 517 aaPredicted RBP20.07■□□□□ 0.8
VPS72-204ENST00000471423 TRIM43BA6NCK2 446 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 H3BQV1 296 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 WNT7AO00755 349 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 PTPN11Q06124 597 aaPredicted RBP20.06■□□□□ 0.8
VPS72-204ENST00000471423 LRCH2Q5VUJ6 765 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 POTEDQ86YR6 584 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 NOSTRINQ8IVI9 506 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 C7orf31Q8N865 590 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 TRIM43Q96BQ3 446 aaPredicted RBP20.06■□□□□ 0.8
VPS72-204ENST00000471423 RIT2Q99578 217 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
VPS72-204ENST00000471423 EMSYQ7Z589 1322 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 LTBP2Q14767 1821 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 GAS7O60861 476 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 KRT76Q01546 638 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 ZNF746Q6NUN9 644 aaPredicted RBP20.05■□□□□ 0.8
VPS72-204ENST00000471423 SESTD1Q86VW0 696 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 GLG1Q92896 1179 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 INTS4Q96HW7 963 aaKnown RBP20.05■□□□□ 0.8
VPS72-204ENST00000471423 PCYT2Q99447 389 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 TEKT3Q9BXF9 490 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 KCNMB3Q9NPA1 279 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 HDAC6Q9UBN7 1215 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 GTF2IRD1Q9UHL9 959 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 TBX21Q9UL17 535 aa20.05■□□□□ 0.8
VPS72-204ENST00000471423 CHMP2AO43633 222 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 LGR5O75473 907 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 PSMD10O75832 226 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 ATG7O95352 703 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 ATP2B1P20020 1258 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 U2AF2P26368 475 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS72-204ENST00000471423 MARK3P27448 753 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 LARP1BQ659C4 914 aaKnown RBP20.04■□□□□ 0.8
VPS72-204ENST00000471423 MCTP1Q6DN14 999 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 GDF6Q6KF10 455 aaPredicted RBP20.04■□□□□ 0.8
VPS72-204ENST00000471423 ABHD15Q6UXT9 468 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 AZI2Q9H6S1 392 aa20.04■□□□□ 0.8
VPS72-204ENST00000471423 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 SUPT20HL2P0C7V6 817 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 SMIM10L2AP0DMW4 78 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 SMIM10L2BP0DMW5 78 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 PTGISQ16647 500 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 MIS18BP1Q6P0N0 1132 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 CCDC60Q8IWA6 550 aaPredicted RBP20.03■□□□□ 0.8
VPS72-204ENST00000471423 SMAP1Q8IYB5 467 aaPredicted RBP20.03■□□□□ 0.8
VPS72-204ENST00000471423 UNC45AQ9H3U1 944 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 RNPEPQ9H4A4 650 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 SMARCAD1Q9H4L7 1026 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 ERAP1Q9NZ08 941 aa20.03■□□□□ 0.8
VPS72-204ENST00000471423 IGKV6D-21A0A0A0MT36 114 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 WDR64B1ANS9 1081 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 BACH1O14867 736 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 NEMFO60524 1076 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 CYP2C9P11712 490 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 ITGB8P26012 769 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 MAGEA10P43363 369 aaPredicted RBP20.02■□□□□ 0.8
VPS72-204ENST00000471423 HIC1Q14526 733 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 HAS1Q92839 578 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 PPP1R12CQ9BZL4 782 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 NOD1Q9Y239 953 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 SAMM50Q9Y512 469 aa20.02■□□□□ 0.8
VPS72-204ENST00000471423 C17orf102A2RUQ5 167 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 TBX3O15119 743 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 MARCH6O60337 910 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 RAG1P15918 1043 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 MCM7P33993 719 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 STAT5BP51692 787 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 ZNF200P98182 395 aaPredicted RBP20.01■□□□□ 0.79
VPS72-204ENST00000471423 MDM2Q00987 491 aaPredicted RBP20.01■□□□□ 0.79
VPS72-204ENST00000471423 FAM160B1Q5W0V3 765 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 SWSAP1Q6NVH7 229 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 PLPPR4Q7Z2D5 763 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 FAM20AQ96MK3 541 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 CTAGE1Q96RT6 745 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 HIPK3Q9H422 1215 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 ZNF302Q9NR11 478 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 DISC1Q9NRI5 854 aa20.01■□□□□ 0.79
VPS72-204ENST00000471423 NOL7Q9UMY1 257 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms