RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 DDX39AO00148 427 aaKnown RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 FOXN1O15353 648 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 CHMP2AO43633 222 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 ABCB7O75027 752 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 SLITRK3O94933 977 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 SMC2O95347 1197 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 LYPLA2O95372 231 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 CCNE2O96020 404 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 IGHA2P01877 340 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 RGS2P41220 211 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 FCGRTP55899 365 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 LACTBP83111 547 aaPredicted RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 AMPD3Q01432 767 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 DPYDQ12882 1025 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 PNOCQ13519 176 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 NEDD9Q14511 834 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 OLFML2BQ68BL8 750 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 CNNM4Q6P4Q7 775 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 CCDC62Q6P9F0 684 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 GRAMD1CQ8IYS0 662 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 NPLOC4Q8TAT6 608 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 SCFD2Q8WU76 684 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 LARP4BQ92615 738 aaKnown RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 PLIN2Q99541 437 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 MTRQ99707 1265 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 APBA2Q99767 749 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 LRRC27Q9C0I9 530 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 KATNBL1Q9H079 304 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 TSPY26PQ9H489 355 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
HDLBP-233ENST00000470710 SLC9A2Q9UBY0 812 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
HDLBP-233ENST00000470710 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 FARP2O94887 1054 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SNAI1O95863 264 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 PRR29P0C7W0 189 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 AFMP43652 599 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SP2Q02086 613 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 TYRO3Q06418 890 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 TTLL4Q14679 1199 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SASS6Q6UVJ0 657 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 METTL7BQ6UX53 244 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SV2BQ7L1I2 683 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 KCNK18Q7Z418 384 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 FBXO16Q8IX29 292 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 TRIML1Q8N9V2 468 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SMARCE1Q969G3 411 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 DYDC2Q96IM9 177 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 GSDMAQ96QA5 445 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 C7orf25Q9BPX7 421 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 TINF2Q9BSI4 451 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 ZSWIM4Q9H7M6 989 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 RNF186Q9NXI6 227 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 RGL1Q9NZL6 768 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
HDLBP-233ENST00000470710 DNM3Q9UQ16 869 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 PCDHA10Q9Y5I2 948 aa9.74□□□□□ -0.85
HDLBP-233ENST00000470710 ATG7O95352 703 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 ARIH2O95376 493 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 EYA4O95677 639 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 TBC1D8O95759 1140 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CAVIN2O95810 425 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 PSAPP07602 524 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 PLA2G4BP0C869 781 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CTGFP29279 349 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 PSMC4P43686 418 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 QARSP47897 775 aaKnown RBP9.73□□□□□ -0.85
HDLBP-233ENST00000470710 ACTR2P61160 394 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 PSMC5P62195 406 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 SP3Q02447 781 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CYP4A11Q02928 519 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
HDLBP-233ENST00000470710 MCM6Q14566 821 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 GSE1Q14687 1217 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 KIF22Q14807 665 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 STX1AQ16623 288 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
HDLBP-233ENST00000470710 TAPT1Q6NXT6 567 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 MIS18BP1Q6P0N0 1132 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 ABHD15Q6UXT9 468 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 EEPD1Q7L9B9 569 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 TPH2Q8IWU9 490 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 C4orf19Q8IY42 314 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 ERCC4Q92889 916 aaPredicted RBP9.73□□□□□ -0.85
HDLBP-233ENST00000470710 TRIM47Q96LD4 638 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 NACC1Q96RE7 527 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 LXNQ9BS40 222 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
HDLBP-233ENST00000470710 ABHD16BQ9H3Z7 469 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms