RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 NOVP48745 357 aa10.43□□□□□ -0.74
TOP3A-203ENST00000469739 RNASE9P60153 205 aaKnown RBP10.43□□□□□ -0.74
TOP3A-203ENST00000469739 CC2D2BQ6DHV5 1058 aa10.43□□□□□ -0.74
TOP3A-203ENST00000469739 GOLGA6L1Q8N7Z2 621 aa10.43□□□□□ -0.74
TOP3A-203ENST00000469739 CNKSR1Q969H4 720 aa10.43□□□□□ -0.74
TOP3A-203ENST00000469739 MYCBPQ99417 103 aaPredicted RBP10.43□□□□□ -0.74
TOP3A-203ENST00000469739 LRRC53A6NM62 1247 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 EML1O00423 815 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 BUB1O43683 1085 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 DCAF17Q5H9S7 520 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 JAKMIP2Q96AA8 810 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 NCAPGQ9BPX3 1015 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 NAA15Q9BXJ9 866 aaKnown RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 EHD2Q9NZN4 543 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 MYH10P35580 1976 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 EFCAB8A8MWE9 144 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 DPEP1P16444 411 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 VWA3BQ502W6 1294 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 CT47A1Q5JQC4 288 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 RDH13Q8NBN7 331 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 NAPGQ99747 312 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 CUEDC2Q9H467 287 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 STK32BQ9NY57 414 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 CAPN11Q9UMQ6 739 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 MYH4Q9Y623 1939 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 ITIH6Q6UXX5 1313 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 ACTN1P12814 892 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 EPS15P42566 896 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 POLR2FP61218 127 aaKnown RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 GFPT1Q06210 699 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 PPP4R3AQ6IN85 833 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 CENPPQ6IPU0 288 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 FLAD1Q8NFF5 587 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 PNKPQ96T60 521 aa10.42□□□□□ -0.74
TOP3A-203ENST00000469739 ARGLU1Q9NWB6 273 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-203ENST00000469739 OPLAHO14841 1288 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ZNF263O14978 683 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 MSH4O15457 936 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PHACTR2O75167 634 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 SASH3O75995 380 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 MYBP10242 640 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PRKG1Q13976 671 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ARSHQ5FYA8 562 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 SFR1Q86XK3 245 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 GSPT2Q8IYD1 628 aaKnown RBP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 CAGE1Q8TC20 777 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 GOLGA1Q92805 767 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PURBQ96QR8 312 aaKnown RBP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 EMILIN3Q9NT22 766 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 NYAP2Q9P242 653 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 CDC23Q9UJX2 597 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ASTN2O75129 1339 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 NCK2O43639 380 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 MOCS3O95396 460 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 CYP11B2P19099 503 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 GUCY2CP25092 1073 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ADAM9Q13443 819 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PDIA5Q14554 519 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ZC2HC1CQ53FD0 456 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 SRLQ86TD4 932 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 FAM114A1Q8IWE2 563 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 CCDC51Q96ER9 411 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 AGBL1Q96MI9 1066 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 TSG101Q99816 390 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 REEP2Q9BRK0 252 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 ZNF70Q9UC06 446 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-203ENST00000469739 SERPINA10Q9UK55 444 aa10.41□□□□□ -0.74
TOP3A-203ENST00000469739 PEX14O75381 377 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 STAT2P52630 851 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 RAPGEF1Q13905 1077 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 SCFD1Q8WVM8 642 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 LSM14BQ9BX40 385 aaKnown RBP10.4□□□□□ -0.74
TOP3A-203ENST00000469739 ARHGAP20Q9P2F6 1191 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
TOP3A-203ENST00000469739 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 GCNT3O95395 438 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 MYL1P05976 194 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 SPDYE6P0CI01 402 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 NR2F2P24468 414 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 SP4Q02446 784 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 RASSF7Q02833 373 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 SPA17Q15506 151 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 TATDN1Q6P1N9 297 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 POTEAQ6S8J7 498 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 TTLL6Q8N841 843 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 RUSC1Q9BVN2 902 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 GOLPH3Q9H4A6 298 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 MYO6Q9UM54 1294 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 DNM3Q9UQ16 869 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 JRKLQ9Y4A0 524 aa10.4□□□□□ -0.74
TOP3A-203ENST00000469739 PLIN4Q96Q06 1357 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms