RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 KANSL2Q9H9L4 492 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
PTCD3-208ENST00000469585 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
PTCD3-208ENST00000469585 RREB1Q92766 1687 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 EP400Q96L91 3159 aa7.97□□□□□ -1.13
PTCD3-208ENST00000469585 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.13
PTCD3-208ENST00000469585 NUP188Q5SRE5 1749 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 TLDC2A0PJX2 215 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 AURKAO14965 403 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 FAM153BP0C7A2 387 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 CYP4F3Q08477 520 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 HSP90AA2PQ14568 343 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-208ENST00000469585 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 C2orf27AQ580R0 203 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 ZNF790Q6PG37 636 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 MCM10Q7L590 875 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 SH3TC2Q8TF17 1288 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 PHACTR3Q96KR7 559 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 AARSD1Q9BTE6 412 aaKnown RBP7.96□□□□□ -1.14
PTCD3-208ENST00000469585 MTFR1LQ9H019 292 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 CARS2Q9HA77 564 aaKnown RBP7.96□□□□□ -1.14
PTCD3-208ENST00000469585 PAK6Q9NQU5 681 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-208ENST00000469585 TSPYL4Q9UJ04 414 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 GPR55Q9Y2T6 319 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-208ENST00000469585 ITGB4P16144 1822 aa7.96□□□□□ -1.14
PTCD3-208ENST00000469585 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 CD3EP07766 207 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 SNRPA1P09661 255 aaKnown RBP7.95□□□□□ -1.14
PTCD3-208ENST00000469585 IFNGR1P15260 489 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 TMPOP42166 694 aaKnown RBP7.95□□□□□ -1.14
PTCD3-208ENST00000469585 LRP8Q14114 963 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 DPY19L1Q2PZI1 675 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
PTCD3-208ENST00000469585 PTF1AQ7RTS3 328 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 FAM9BQ8IZU0 186 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 NLGN1Q8N2Q7 840 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 CYP26B1Q9NR63 512 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 PCMTD2Q9NV79 361 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 BABAM1Q9NWV8 329 aa7.95□□□□□ -1.14
PTCD3-208ENST00000469585 TMEM82A0PJX8 343 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 STXBP3O00186 592 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 FGFR1P11362 822 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 HOXC12P31275 282 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 NOP2P46087 812 aaKnown RBP7.94□□□□□ -1.14
PTCD3-208ENST00000469585 ZP2Q05996 745 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 SLC39A6Q13433 755 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 SQSTM1Q13501 440 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 SF1Q15637 639 aaKnown RBP7.94□□□□□ -1.14
PTCD3-208ENST00000469585 YOD1Q5VVQ6 348 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-208ENST00000469585 FOXB2Q5VYV0 432 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 FLCNQ8NFG4 579 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 COPS5Q92905 334 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 ANGEL1Q9UNK9 670 aaKnown RBP7.94□□□□□ -1.14
PTCD3-208ENST00000469585 ZNF652Q9Y2D9 606 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 MRC1P22897 1456 aa7.94□□□□□ -1.14
PTCD3-208ENST00000469585 C5P01031 1676 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 LY75O60449 1722 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 TRAV20A0A0B4J274 112 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 SSU72P8A0A1W2PR75 194 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 HYAL3O43820 417 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-208ENST00000469585 FKTNO75072 461 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 ZBTB7AO95365 584 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 WNT11O96014 354 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 SCG5P05408 212 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 FUT4P22083 530 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
PTCD3-208ENST00000469585 GFRA1P56159 465 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 GNAI1P63096 354 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 RCSD1Q6JBY9 416 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 ZPBP2Q6X784 338 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 IL17REQ8NFR9 667 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 OSBP2Q969R2 916 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 CCDC140Q96MF4 163 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 PLEKHF1Q96S99 279 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
PTCD3-208ENST00000469585 RRP7AQ9Y3A4 280 aaKnown RBP7.93□□□□□ -1.14
PTCD3-208ENST00000469585 BACE2Q9Y5Z0 518 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 PTCH2Q9Y6C5 1203 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 CEMIPQ8WUJ3 1361 aa7.93□□□□□ -1.14
PTCD3-208ENST00000469585 TOGARAM1Q9Y4F4 1720 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 APAF1O14727 1248 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 GSTM1P09488 218 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 DCTN1Q14203 1278 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 ZNF827Q17R98 1081 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 ZC3H12BQ5HYM0 836 aaKnown RBP7.92□□□□□ -1.14
PTCD3-208ENST00000469585 KIF6Q6ZMV9 814 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 C1orf159Q96HA4 380 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 EXOC2Q96KP1 924 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 IER2Q9BTL4 223 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
PTCD3-208ENST00000469585 TMEM260Q9NX78 707 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 HEG1Q9ULI3 1381 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 C4BP0C0L5 1744 aa7.92□□□□□ -1.14
PTCD3-208ENST00000469585 C2orf71A6NGG8 1288 aa7.91□□□□□ -1.14
PTCD3-208ENST00000469585 FGF10O15520 208 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms