RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 BCCIPQ9P287 314 aaKnown RBP eCLIP13.28□□□□□ -0.28
VARS2-205ENST00000469358 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 EPS15P42566 896 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 MEI1Q5TIA1 1274 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
VARS2-205ENST00000469358 CD209Q9NNX6 404 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
VARS2-205ENST00000469358 RTCBQ9Y3I0 505 aaKnown RBP13.28□□□□□ -0.28
VARS2-205ENST00000469358 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 FGFR1OPO95684 399 aaKnown RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 KRT18P05783 430 aaKnown RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 INPP5BP32019 993 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 PPP1R2P41236 205 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 GSTO1P78417 241 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 KCNH2Q12809 1159 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 COBLL1Q53SF7 1204 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 DCAF17Q5H9S7 520 aaPredicted RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 NAA35Q5VZE5 725 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 ADAT2Q7Z6V5 191 aaKnown RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 TRIM59Q8IWR1 403 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 IPO4Q8TEX9 1081 aaKnown RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 PLA2G4BP0C869 781 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 COPB2P35606 906 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.28
VARS2-205ENST00000469358 KCNA1Q09470 495 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 PAK2Q13177 524 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 KCNV1Q6PIU1 500 aa13.27□□□□□ -0.28
VARS2-205ENST00000469358 LAMB2P55268 1798 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 MPHOSPH10O00566 681 aaKnown RBP13.27□□□□□ -0.29
VARS2-205ENST00000469358 NR1D1P20393 614 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 TMOD1P28289 359 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 ASIC2Q16515 512 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
VARS2-205ENST00000469358 TMCO5BA8MYB1 307 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 MED24O75448 989 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 NR2F2P24468 414 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RFC4P35249 363 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 PABPC4Q13310 644 aaKnown RBP eCLIP13.26□□□□□ -0.292e-8■■■■□ 24.4
VARS2-205ENST00000469358 ARSHQ5FYA8 562 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RNF187Q5TA31 235 aaPredicted RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 CELF4Q9BZC1 486 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RREB1Q92766 1687 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 GPR75-ASB3A0A0A6YYF3 556 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 DCDC2CA8MYV0 355 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 LDHCP07864 332 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 POLD1P28340 1107 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 HNRNPH1P31943 449 aaKnown RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 CASP4P49662 377 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 SKOR1P84550 965 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 SEMA3FQ13275 785 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
VARS2-205ENST00000469358 GANQ9H2C0 597 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 KCTD10Q9H3F6 313 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 AMACRQ9UHK6 382 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 PCDHGC5Q9Y5F6 944 aa13.26□□□□□ -0.29
VARS2-205ENST00000469358 CLIC2O15247 247 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 CYP11B2P19099 503 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 ECHS1P30084 290 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 GRAPQ13588 217 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 PDIA5Q14554 519 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 RPS6KA1Q15418 735 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 UAP1Q16222 522 aaPredicted RBP13.25□□□□□ -0.29
VARS2-205ENST00000469358 GBP6Q6ZN66 633 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
VARS2-205ENST00000469358 SPAG5Q96R06 1193 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
VARS2-205ENST00000469358 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 E7EVH7 732 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 SCNN1DP51172 638 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 DPH5Q9H2P9 285 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 DDX60LQ5H9U9 1706 aaKnown RBP13.25□□□□□ -0.29
VARS2-205ENST00000469358 MYBP10242 640 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 HSD17B3P37058 310 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 GTF2IP78347 998 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 IFT88Q13099 833 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms