RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 STEAP3Q658P3 488 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 STYK1Q6J9G0 422 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 FGD2Q7Z6J4 655 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 STK32CQ86UX6 486 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 TTLL6Q8N841 843 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 ZCRB1Q8TBF4 217 aaKnown RBP7.23□□□□□ -1.25
LSM5-209ENST00000468872 ADAMTS17Q8TE56 1095 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 SCLYQ96I15 445 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 PCDH12Q9NPG4 1184 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 CLDND1Q9NY35 253 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
LSM5-209ENST00000468872 HGSO14964 777 aaPredicted RBP7.22□□□□□ -1.25
LSM5-209ENST00000468872 EFCAB14O75071 495 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 RPL13P26373 211 aaKnown RBP7.22□□□□□ -1.25
LSM5-209ENST00000468872 AMPD3Q01432 767 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 PLP2Q04941 152 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 MAMDC2Q7Z304 686 aaPredicted RBP7.22□□□□□ -1.25
LSM5-209ENST00000468872 KRT26Q7Z3Y9 468 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 PRRT2Q7Z6L0 340 aaPredicted RBP7.22□□□□□ -1.25
LSM5-209ENST00000468872 DCAF4Q8WV16 495 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 YIPF4Q9BSR8 244 aa7.22□□□□□ -1.25
LSM5-209ENST00000468872 NOP58Q9Y2X3 529 aaKnown RBP7.22□□□□□ -1.25
LSM5-209ENST00000468872 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 FAM83GA6ND36 823 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 GSG1L2A8MUP6 293 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 PDE8AO60658 829 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 TADA3O75528 432 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 DGKIO75912 1065 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 EMC4Q5J8M3 183 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 ARRDC4Q8NCT1 418 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.21□□□□□ -1.26
LSM5-209ENST00000468872 DDX1Q92499 740 aaKnown RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 TARS2Q9BW92 718 aaKnown RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 NGRNQ9NPE2 291 aaKnown RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 INTS7Q9NVH2 962 aaKnown RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 MAGEC2Q9UBF1 373 aaPredicted RBP7.21□□□□□ -1.26
LSM5-209ENST00000468872 PCDHB4Q9Y5E5 795 aa7.21□□□□□ -1.26
LSM5-209ENST00000468872 TCRBV5S2A0A599 114 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 RASGRP1O95267 797 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 IBSPP21815 317 aaPredicted RBP7.2□□□□□ -1.26
LSM5-209ENST00000468872 CNR2P34972 360 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 STAT3P40763 770 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 NKX3-2P78367 333 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 CNNM4Q6P4Q7 775 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 RNF180Q86T96 592 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 LRRTM3Q86VH5 581 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 FAM126AQ9BYI3 521 aaPredicted RBP7.2□□□□□ -1.26
LSM5-209ENST00000468872 GPR27Q9NS67 375 aa7.2□□□□□ -1.26
LSM5-209ENST00000468872 TNPO3Q9Y5L0 923 aaKnown RBP7.2□□□□□ -1.26
LSM5-209ENST00000468872 AQP7O14520 342 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 MSCO60682 206 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 CRTAMO95727 393 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 KRTAP10-2P60368 255 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 IGBP1P78318 339 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 EFEMP1Q12805 493 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 ZNF460Q14592 562 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 PRR31Q5SQ13 230 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 RSPO2Q6UXX9 243 aaPredicted RBP7.19□□□□□ -1.26
LSM5-209ENST00000468872 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
LSM5-209ENST00000468872 DTLQ9NZJ0 730 aa7.19□□□□□ -1.26
LSM5-209ENST00000468872 TCRBV16S1A1N1A0A5B0 115 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 POU3F3P20264 500 aaPredicted RBP7.18□□□□□ -1.26
LSM5-209ENST00000468872 GPR85P60893 370 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 ADAM9Q13443 819 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 FAM26FQ5R3K3 315 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 UBR7Q8N806 425 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 CHAC2Q8WUX2 184 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 MAGEB10Q96LZ2 347 aaPredicted RBP7.18□□□□□ -1.26
LSM5-209ENST00000468872 ZFYVE21Q9BQ24 234 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 MYOTQ9UBF9 498 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
LSM5-209ENST00000468872 OPA1O60313 960 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 ASLP04424 464 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 NFKB2Q00653 900 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 SPATS1Q496A3 300 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 MCTP2Q6DN12 878 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
LSM5-209ENST00000468872 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 PPARGC1AQ9UBK2 798 aaKnown RBP7.17□□□□□ -1.26
LSM5-209ENST00000468872 CNOT11Q9UKZ1 510 aaKnown RBP7.17□□□□□ -1.26
LSM5-209ENST00000468872 MAPRE3Q9UPY8 281 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 PCDHA8Q9Y5H6 950 aa7.17□□□□□ -1.26
LSM5-209ENST00000468872 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.26
LSM5-209ENST00000468872 LRG1P02750 347 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 POU3F2P20265 443 aaPredicted RBP7.16□□□□□ -1.26
LSM5-209ENST00000468872 CNGA1P29973 690 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 IGFALSP35858 605 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 ANAPC15P60006 121 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 KIAA2012Q0VF49 1180 aa7.16□□□□□ -1.26
LSM5-209ENST00000468872 LBX2Q6XYB7 198 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms