RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 HDAC5Q9UQL6 1122 aa5.07□□□□□ -1.6
CPS1-205ENST00000467353 FASNP49327 2511 aaKnown RBP5.07□□□□□ -1.6
CPS1-205ENST00000467353 CEP250Q9BV73 2442 aa5.07□□□□□ -1.6
CPS1-205ENST00000467353 ZZEF1O43149 2961 aa5.07□□□□□ -1.6
CPS1-205ENST00000467353 EMSYQ7Z589 1322 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 RAD50Q92878 1312 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 IGKV6D-41A0A0C4DH26 115 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 TCRBV5S4A2TA0A5A2 114 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 C2CD4DB7Z1M9 353 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 NKRFO15226 690 aaKnown RBP eCLIP5.06□□□□□ -1.6
CPS1-205ENST00000467353 MMP3P08254 477 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 NUDT7P0C024 238 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 BMP3P12645 472 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 PDE6AP16499 860 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 PSEN2P49810 448 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 PPP2R5BQ15173 497 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 CCDC62Q6P9F0 684 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 CTR9Q6PD62 1173 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 TMED8Q6PL24 325 aaPredicted RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 SERINC5Q86VE9 423 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 KLHL23Q8NBE8 558 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 PRR7Q8TB68 274 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 SCFD2Q8WU76 684 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 POF1BQ8WVV4 589 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 RIN2Q8WYP3 895 aaPredicted RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 PPP2R3CQ969Q6 453 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 MKL1Q969V6 931 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 EAF2Q96CJ1 260 aaPredicted RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 ZNF689Q96CS4 500 aaPredicted RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 PLVAPQ9BX97 442 aa5.06□□□□□ -1.6
CPS1-205ENST00000467353 CCDC8Q9H0W5 538 aaPredicted RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 RC3H2Q9HBD1 1191 aaKnown RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 MRPL42Q9Y6G3 142 aaKnown RBP5.06□□□□□ -1.6
CPS1-205ENST00000467353 MYO7AQ13402 2215 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 CDK5RAP2Q96SN8 1893 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ADGRA3Q8IWK6 1321 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ZNF532Q9HCE3 1301 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 SPTBN2O15020 2390 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 SIP14410 1827 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 HAS3O00219 553 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 NFIBO00712 420 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ENPP3O14638 875 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 PPFIA3O75145 1194 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ZIC2O95409 532 aaPredicted RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 SP9P0CG40 484 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 CASTP20810 708 aaKnown RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 RASA1P20936 1047 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 SDHBP21912 280 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 EDNRBP24530 442 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 TECP42680 631 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ARHGAP1Q07960 439 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 KCNC3Q14003 757 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 BTG3Q14201 252 aaPredicted RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 DUSP6Q16828 381 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 LY6KQ17RY6 165 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 KIAA0753Q2KHM9 967 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 SLFN13Q68D06 897 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ANKRD54Q6NXT1 300 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 TMEM184AQ6ZMB5 413 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 CHST3Q7LGC8 479 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 RPAP2Q8IXW5 612 aaPredicted RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 STK11IPQ8N1F8 1099 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 GMCL1P1Q8NEA9 526 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 MICAL1Q8TDZ2 1067 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 LRRN4Q8WUT4 740 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 STAG1Q8WVM7 1258 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 P2RX5Q93086 422 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 NEK1Q96PY6 1258 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 UCN2Q96RP3 112 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ERVK-5Q9HDB9 667 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ATP8A2Q9NTI2 1148 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ADD3Q9UEY8 706 aaKnown RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 METRNQ9UJH8 293 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 NOB1Q9ULX3 412 aaKnown RBP5.05□□□□□ -1.6
CPS1-205ENST00000467353 RWDD3Q9Y3V2 267 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 NR2E1Q9Y466 385 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 SPEGQ15772 3267 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 GPR179Q6PRD1 2367 aa5.05□□□□□ -1.6
CPS1-205ENST00000467353 ZFYVE26Q68DK2 2539 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 FLNBO75369 2602 aaKnown RBP5.04□□□□□ -1.6
CPS1-205ENST00000467353 FRYQ5TBA9 3013 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 LOC102724159A0A0B4J2E5 919 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 SOBPA7XYQ1 873 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 DGKIO75912 1065 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 MBD4O95243 580 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 GH1P01241 217 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 CHGBP05060 677 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 CTSHP09668 335 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 ZNF286BP0CG31 522 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 CDK11BP21127 795 aaKnown RBP5.04□□□□□ -1.6
CPS1-205ENST00000467353 TGM1P22735 817 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 MCCP23508 829 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 CALML3P27482 149 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 STAT2P52630 851 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 ERVFC1P60507 584 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 PWP2Q15269 919 aaKnown RBP5.04□□□□□ -1.6
CPS1-205ENST00000467353 DGKDQ16760 1214 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 NAALADL2Q58DX5 795 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 PPM1JQ5JR12 505 aa5.04□□□□□ -1.6
CPS1-205ENST00000467353 VARS2Q5ST30 1063 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms