RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ATG7O95352 703 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
MSH5-212ENST00000467319 PSEN2P49810 448 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 SP4Q02446 784 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 PTPN11Q06124 597 aaPredicted RBP12.52□□□□□ -0.41
MSH5-212ENST00000467319 MFSD10Q14728 455 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 ZNF746Q6NUN9 644 aaPredicted RBP12.52□□□□□ -0.41
MSH5-212ENST00000467319 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.41
MSH5-212ENST00000467319 H3BRB1 525 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 KIAA0355O15063 1070 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 TBX3O15119 743 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 B4GALT4O60513 344 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 CCNT1O60563 726 aaKnown RBP12.51□□□□□ -0.41
MSH5-212ENST00000467319 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 KRT76Q01546 638 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
MSH5-212ENST00000467319 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 ABHD15Q6UXT9 468 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 SMAP1Q8IYB5 467 aaPredicted RBP12.51□□□□□ -0.41
MSH5-212ENST00000467319 SEPT1Q8WYJ6 367 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 DPF3Q92784 378 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 HAS1Q92839 578 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 TUT1Q9H6E5 874 aaKnown RBP12.51□□□□□ -0.41
MSH5-212ENST00000467319 GTF2IRD1Q9UHL9 959 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 VAV3Q9UKW4 847 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 IGSF9BQ9UPX0 1349 aa12.51□□□□□ -0.41
MSH5-212ENST00000467319 H0YGN5 161 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
MSH5-212ENST00000467319 NEMFO60524 1076 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 GAS7O60861 476 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 CLTBP09497 229 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 SUPT20HL2P0C7V6 817 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 SPIRE1Q08AE8 756 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 CCDC60Q8IWA6 550 aaPredicted RBP12.5□□□□□ -0.41
MSH5-212ENST00000467319 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 GJA10Q969M2 543 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 FAM20AQ96MK3 541 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
MSH5-212ENST00000467319 WDR81Q562E7 1941 aa12.5□□□□□ -0.41
MSH5-212ENST00000467319 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 DCDC2CA8MYV0 355 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 WDR64B1ANS9 1081 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 PDCP20941 246 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 TOB1P50616 345 aaPredicted RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 PPP2R5CQ13362 524 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 HIC1Q14526 733 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 SH3RF1Q7Z6J0 888 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 RDM1Q8NG50 284 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 ERAP1Q9NZ08 941 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
MSH5-212ENST00000467319 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
MSH5-212ENST00000467319 LAMA3Q16787 3333 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 H3BQV1 296 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
MSH5-212ENST00000467319 SMIM10L2AP0DMW4 78 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SMIM10L2BP0DMW5 78 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SYT1P21579 422 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 ITGB8P26012 769 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SFNP31947 248 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SLC26A2P50443 739 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 JAK3P52333 1124 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 ADAM17P78536 824 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 RBL2Q08999 1139 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 GNL2Q13823 731 aaKnown RBP12.48□□□□□ -0.41
MSH5-212ENST00000467319 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 UTP14CQ5TAP6 766 aaKnown RBP12.48□□□□□ -0.41
MSH5-212ENST00000467319 PLPPR4Q7Z2D5 763 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 C7orf31Q8N865 590 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 NOC4LQ9BVI4 516 aaKnown RBP12.48□□□□□ -0.41
MSH5-212ENST00000467319 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 PRO3102Q9H379 93 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
MSH5-212ENST00000467319 SYN1P17600 705 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 MCM7P33993 719 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 NBR1Q14596 966 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 CALCRLQ16602 461 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 UGCGQ16739 394 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 FAM47CQ5HY64 1035 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 MIS18BP1Q6P0N0 1132 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 BRAPQ7Z569 592 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms