RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PI4KAP2A4QPH2 592 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 SORBS3O60504 671 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 PHACTR2O75167 634 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 CYP2C8P10632 490 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 HIBADHP31937 336 aaKnown RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 SMAD3P84022 425 aaKnown RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 IFIT5Q13325 482 aaKnown RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 UBE4AQ14139 1066 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 FAM110CQ1W6H9 321 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 PI16Q6UXB8 463 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 PI4KAP1Q8N8J0 262 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 GLIS3Q8NEA6 775 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 SNX29Q8TEQ0 813 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 FBF1Q8TES7 1133 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 SMCR8Q8TEV9 937 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-207ENST00000467273 CHRDQ9H2X0 955 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 MYH16Q9H6N6 1097 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 FAM105AQ9NUU6 356 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 VTI1BQ9UEU0 232 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 DAGLAQ9Y4D2 1042 aa6.83□□□□□ -1.32
PTCD3-207ENST00000467273 MAST2Q6P0Q8 1798 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 PFASO15067 1338 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 TAF5LO75529 589 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 POLR3DP05423 398 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-207ENST00000467273 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
PTCD3-207ENST00000467273 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 GNA15P30679 374 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 GCLCP48506 637 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-207ENST00000467273 CASP7P55210 303 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 GCKRQ14397 625 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 MAP3K21Q5TCX8 1036 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 HHIPL2Q6UWX4 724 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 FAM151AQ8WW52 585 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 TMEM40Q8WWA1 233 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 CCDC74AQ96AQ1 378 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 IFT57Q9NWB7 429 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 PTPRFP10586 1907 aa6.82□□□□□ -1.32
PTCD3-207ENST00000467273 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 SNAP23O00161 211 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 EREGO14944 169 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 DYNC1LI2O43237 492 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 CD8BP10966 210 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 FOSL2P15408 326 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 FUT4P22083 530 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 MAOBP27338 520 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 GNAI1P63096 354 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 CWF19L2Q2TBE0 894 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 PLD6Q8N2A8 252 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 EPS8L3Q8TE67 593 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 ATXN2LQ8WWM7 1075 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 RUNDC1Q96C34 613 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 PICK1Q9NRD5 415 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 RAD18Q9NS91 495 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
PTCD3-207ENST00000467273 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
PTCD3-207ENST00000467273 LRRC10BA6NIK2 292 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 SCAMP3O14828 347 aaKnown RBP6.8□□□□□ -1.32
PTCD3-207ENST00000467273 EDN3P14138 238 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 CD96P40200 585 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 ASPAP45381 313 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 MAP3K12Q12852 859 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTCD3-207ENST00000467273 LRRC26Q2I0M4 334 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 LDHAL6AQ6ZMR3 332 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 MIGA2Q7L4E1 593 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 DOCK3Q8IZD9 2030 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 SCYL3Q8IZE3 742 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 FAM181AQ8N9Y4 354 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 LRRN4CLQ8ND94 238 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 LINS1Q8NG48 757 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 SOCS4Q8WXH5 440 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 FAM84BQ96KN1 310 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-207ENST00000467273 C1QTNF1Q9BXJ1 281 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 STK31Q9BXU1 1019 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 BHLHE41Q9C0J9 482 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-207ENST00000467273 C1GALT1Q9NS00 363 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 GJD2Q9UKL4 321 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 AGTPBP1Q9UPW5 1226 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 JAG2Q9Y219 1238 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 AFG3L2Q9Y4W6 797 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 NCOR1O75376 2440 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 LTBP2Q14767 1821 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 PIEZO1Q92508 2521 aa6.8□□□□□ -1.32
PTCD3-207ENST00000467273 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 DOCK2Q92608 1830 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CTSBP07858 339 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CACNB3P54284 484 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms