RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMC4-207ENST00000467263 KISS1RQ969F8 398 aaPredicted RBP6.4□□□□□ -1.38
SMC4-207ENST00000467263 PHF20Q9BVI0 1012 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 TMEM168Q9H0V1 697 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 CDIP1Q9H305 208 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 ZSWIM4Q9H7M6 989 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 CDK11AQ9UQ88 783 aaPredicted RBP6.4□□□□□ -1.38
SMC4-207ENST00000467263 PCDHB4Q9Y5E5 795 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 NPFFR2Q9Y5X5 522 aa6.4□□□□□ -1.38
SMC4-207ENST00000467263 MSCO60682 206 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 GTF2A2P52657 109 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 EPHB4P54760 987 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 LSAMPQ13449 338 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 TESK1Q15569 626 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 CCDC144BQ3MJ40 725 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 EMC4Q5J8M3 183 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 PROSER1Q86XN7 944 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 RBM12BQ8IXT5 1001 aaKnown RBP6.39□□□□□ -1.39
SMC4-207ENST00000467263 EXOC2Q96KP1 924 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 CLDND1Q9NY35 253 aa6.39□□□□□ -1.39
SMC4-207ENST00000467263 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
SMC4-207ENST00000467263 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
SMC4-207ENST00000467263 TRBV23-1A0A0A0MS06 115 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 B4GALT4O60513 344 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 AMHP03971 560 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 ACVRL1P37023 503 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 PPP2CBP62714 309 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 PPP2CAP67775 309 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 R3HDM1Q15032 1099 aaKnown RBP6.38□□□□□ -1.39
SMC4-207ENST00000467263 SCUBE1Q8IWY4 988 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 NUDT10Q8NFP7 164 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 CLIC6Q96NY7 704 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 MEGF9Q9H1U4 602 aa6.38□□□□□ -1.39
SMC4-207ENST00000467263 NGRNQ9NPE2 291 aaKnown RBP6.38□□□□□ -1.39
SMC4-207ENST00000467263 H7BY64 318 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 RBM10P98175 930 aaKnown RBP6.37□□□□□ -1.39
SMC4-207ENST00000467263 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
SMC4-207ENST00000467263 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
SMC4-207ENST00000467263 LILRB2Q8N423 598 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 DCAF4Q8WV16 495 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
SMC4-207ENST00000467263 JAM3Q9BX67 310 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 GPR27Q9NS67 375 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 MYOTQ9UBF9 498 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 ZDHHC9Q9Y397 364 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 TRAF6Q9Y4K3 522 aa6.37□□□□□ -1.39
SMC4-207ENST00000467263 ASXL2Q76L83 1435 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 GRIN1Q05586 938 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 NFATC3Q12968 1075 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 SURF1Q15526 300 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 STYK1Q6J9G0 422 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 ARHGEF18Q6ZSZ5 1173 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 DPH6Q7L8W6 267 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 CLEC4DQ8WXI8 215 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 MRFAP1L1Q96HT8 127 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 DHRS4Q9BTZ2 278 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 MRIQ9BWK5 157 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 VPS11Q9H270 941 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 JADE2Q9NQC1 790 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 USP35Q9P2H5 1018 aa6.36□□□□□ -1.39
SMC4-207ENST00000467263 PATE3B3GLJ2 98 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 HMGA2P52926 109 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 SUMO1P63165 101 aaKnown RBP6.35□□□□□ -1.39
SMC4-207ENST00000467263 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 RSPO2Q6UXX9 243 aaPredicted RBP6.35□□□□□ -1.39
SMC4-207ENST00000467263 PLEKHH3Q7Z736 793 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 PIP4K2CQ8TBX8 421 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 DEF6Q9H4E7 631 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 PIF1Q9H611 641 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 ASH2LQ9UBL3 628 aa6.35□□□□□ -1.39
SMC4-207ENST00000467263 MRPS23Q9Y3D9 190 aaKnown RBP6.35□□□□□ -1.39
SMC4-207ENST00000467263 OVOL3O00110 214 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 SLC27A2O14975 620 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 DGKIO75912 1065 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 KLHL18O94889 574 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 CNOT4O95628 575 aaKnown RBP6.34□□□□□ -1.39
SMC4-207ENST00000467263 LTFP02788 710 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 C6orf222P0C671 652 aaPredicted RBP6.34□□□□□ -1.39
SMC4-207ENST00000467263 GDF5P43026 501 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 C2orf27AQ580R0 203 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 LBX2Q6XYB7 198 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 IFNL3Q8IZI9 196 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 KLHL36Q8N4N3 616 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 Q8TCH9 128 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 THAP3Q8WTV1 239 aaPredicted RBP6.34□□□□□ -1.39
SMC4-207ENST00000467263 GNRHR2Q96P88 292 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 EPB41L1Q9H4G0 881 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 FTSJ1Q9UET6 329 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 ING1Q9UK53 422 aaPredicted RBP6.34□□□□□ -1.39
SMC4-207ENST00000467263 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
SMC4-207ENST00000467263 GPR85P60893 370 aa6.33□□□□□ -1.4
SMC4-207ENST00000467263 KLF10Q13118 480 aa6.33□□□□□ -1.4
SMC4-207ENST00000467263 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
SMC4-207ENST00000467263 SLFN13Q68D06 897 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms