RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 TRIM22Q8IYM9 498 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 PHOSPHO2Q8TCD6 241 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 GDPD5Q8WTR4 605 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 BRF1Q92994 677 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 RRP36Q96EU6 259 aaKnown RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 ZSCAN31Q96LW9 406 aaPredicted RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 NOC4LQ9BVI4 516 aaKnown RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 DAXXQ9UER7 740 aaPredicted RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 MAD2L2Q9UI95 211 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 RALYQ9UKM9 306 aaKnown RBP7.99□□□□□ -1.13
CLDN4-204ENST00000466411 PRR12Q9ULL5 1215 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 KIF3AQ9Y496 699 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 ABCB11O95342 1321 aa7.99□□□□□ -1.13
CLDN4-204ENST00000466411 PNMA6FA0A0J9YX94 578 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 CTAGE5O15320 804 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 ASGR1P07306 291 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 FCER1AP12319 257 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 XBP1P17861 261 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 NEK4P51957 841 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 PLS1Q14651 629 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
CLDN4-204ENST00000466411 DMRTA1Q5VZB9 504 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 SNRNP48Q6IEG0 339 aaKnown RBP7.98□□□□□ -1.13
CLDN4-204ENST00000466411 PPP1R18Q6NYC8 613 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 CHST3Q7LGC8 479 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 MSL3Q8N5Y2 521 aaKnown RBP7.98□□□□□ -1.13
CLDN4-204ENST00000466411 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 WASF1Q92558 559 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 TATDN2Q93075 761 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 ATG4CQ96DT6 458 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 AMNQ9BXJ7 453 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 HIPK3Q9H422 1215 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 RIOX1Q9H6W3 641 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 ACAD9Q9H845 621 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 ZNF214Q9UL59 606 aaPredicted RBP7.98□□□□□ -1.13
CLDN4-204ENST00000466411 CCPG1Q9ULG6 757 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 MRPL11Q9Y3B7 192 aaKnown RBP7.98□□□□□ -1.13
CLDN4-204ENST00000466411 TAF6LQ9Y6J9 622 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
CLDN4-204ENST00000466411 SIP14410 1827 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 A0A0U1RQG5 324 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 LCHNA4D1U4 455 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 FAM205CA6NFA0 338 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 SMAPO00193 183 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ADCY6O43306 1168 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 AKR1A1P14550 325 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ERCC3P19447 782 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 LTBRP36941 435 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 NKX3-2P78367 333 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 CDC37Q16543 378 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 KIAA1755Q5JYT7 1200 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 TMTC3Q6ZXV5 915 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 DGLUCYQ7Z3D6 616 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 NCAPG2Q86XI2 1143 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 FBXO11Q86XK2 927 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 HERC6Q8IVU3 1022 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 RPUSD2Q8IZ73 545 aaKnown RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ADGRF4Q8IZF3 695 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ADSSL1Q8N142 457 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 CCDC148Q8NFR7 591 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 MTMR8Q96EF0 704 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 SCLYQ96I15 445 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 GLT1D1Q96MS3 346 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 NUP88Q99567 741 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 TINF2Q9BSI4 451 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 RNF26Q9BY78 433 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ADD3Q9UEY8 706 aaKnown RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 NAP1L2Q9ULW6 460 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 MTMR7Q9Y216 660 aa7.97□□□□□ -1.13
CLDN4-204ENST00000466411 DIS3Q9Y2L1 958 aaKnown RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ANKRD11Q6UB99 2663 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 SETXQ7Z333 2677 aaKnown RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 FRMPD2Q68DX3 1309 aaPredicted RBP7.97□□□□□ -1.13
CLDN4-204ENST00000466411 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 PDIA4P13667 645 aaKnown RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 IFNAR1P17181 557 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 ZXDAP98168 799 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 TMEM132BQ14DG7 1078 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 SMAD2Q15796 467 aaKnown RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 PACS2Q86VP3 889 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 SUGP1Q8IWZ8 645 aaKnown RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 REPS2Q8NFH8 660 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 BICD2Q8TD16 824 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 CUL5Q93034 780 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 SLC9A7Q96T83 725 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 LLPHQ9BRT6 129 aaKnown RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 SLKQ9H2G2 1235 aaPredicted RBP7.96□□□□□ -1.14
CLDN4-204ENST00000466411 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 FBXO28Q9NVF7 368 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 DLL3Q9NYJ7 618 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 LIMCH1Q9UPQ0 1083 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 STK36Q9NRP7 1315 aa7.96□□□□□ -1.14
CLDN4-204ENST00000466411 FRYLO94915 3013 aa7.95□□□□□ -1.14
CLDN4-204ENST00000466411 TLR3O15455 904 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms