RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TRPV6Q9H1D0 765 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 FOXP1Q9H334 677 aaPredicted RBP14.03□□□□□ -0.16
CHPF2-202ENST00000465601 PRDM5Q9NQX1 630 aaPredicted RBP14.03□□□□□ -0.16
CHPF2-202ENST00000465601 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 MROH7Q68CQ1 1323 aa14.03□□□□□ -0.16
CHPF2-202ENST00000465601 KIF28PB7ZC32 967 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 H3BRB1 525 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 HAS3O00219 553 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.17
CHPF2-202ENST00000465601 CCNE2O96020 404 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 CLTBP09497 229 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 LARP1BQ659C4 914 aaKnown RBP14.02□□□□□ -0.17
CHPF2-202ENST00000465601 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 HSCBQ8IWL3 235 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 SLC5A5Q92911 643 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 KATNAL1Q9BW62 490 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
CHPF2-202ENST00000465601 PDLIM7Q9NR12 457 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TBC1D22BQ9NU19 505 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TRMT13Q9NUP7 481 aaKnown RBP14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.17
CHPF2-202ENST00000465601 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 H3BQV1 296 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 WNT7AO00755 349 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 B4GALT4O60513 344 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 GAS7O60861 476 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 ATG7O95352 703 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 CD4P01730 458 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
CHPF2-202ENST00000465601 LRCH2Q5VUJ6 765 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 C7orf31Q8N865 590 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 ETNPPLQ8TBG4 499 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 GLG1Q92896 1179 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
CHPF2-202ENST00000465601 PCYT2Q99447 389 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 NAP1L4Q99733 375 aaKnown RBP14.01□□□□□ -0.17
CHPF2-202ENST00000465601 PRKAG2Q9UGJ0 569 aa14.01□□□□□ -0.17
CHPF2-202ENST00000465601 LGR5O75473 907 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 U2AF2P26368 475 aaKnown RBP eCLIP14□□□□□ -0.17
CHPF2-202ENST00000465601 MARK3P27448 753 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 KRT76Q01546 638 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
CHPF2-202ENST00000465601 GDF6Q6KF10 455 aaPredicted RBP14□□□□□ -0.17
CHPF2-202ENST00000465601 ZNF746Q6NUN9 644 aaPredicted RBP14□□□□□ -0.17
CHPF2-202ENST00000465601 ABHD15Q6UXT9 468 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 NOSTRINQ8IVI9 506 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
CHPF2-202ENST00000465601 RIT2Q99578 217 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 TEKT3Q9BXF9 490 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 SMARCAD1Q9H4L7 1026 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 AZI2Q9H6S1 392 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 ZNF215Q9UL58 517 aaPredicted RBP14□□□□□ -0.17
CHPF2-202ENST00000465601 EVPLQ92817 2033 aa14□□□□□ -0.17
CHPF2-202ENST00000465601 RANBP2P49792 3224 aaKnown RBP13.99□□□□□ -0.17
CHPF2-202ENST00000465601 BACH1O14867 736 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 CHMP2AO43633 222 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 MARCH6O60337 910 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 PSMD10O75832 226 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 CYP2C9P11712 490 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 ITGB8P26012 769 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 STAT5BP51692 787 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 ZNF200P98182 395 aaPredicted RBP13.99□□□□□ -0.17
CHPF2-202ENST00000465601 HIC1Q14526 733 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 ZNF174Q15697 407 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 PRPF38BQ5VTL8 546 aaKnown RBP13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 HAS1Q92839 578 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 FAM20AQ96MK3 541 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 UNC45AQ9H3U1 944 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 KCNMB3Q9NPA1 279 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 TBX21Q9UL17 535 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 SAMM50Q9Y512 469 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
CHPF2-202ENST00000465601 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 RAG1P15918 1043 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 MCM7P33993 719 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
CHPF2-202ENST00000465601 PTGISQ16647 500 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 CCDC60Q8IWA6 550 aaPredicted RBP13.98□□□□□ -0.17
CHPF2-202ENST00000465601 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
CHPF2-202ENST00000465601 LBHD1Q9BQE6 289 aaPredicted RBP13.98□□□□□ -0.17
CHPF2-202ENST00000465601 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 DISC1Q9NRI5 854 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 ERAP1Q9NZ08 941 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 NOD1Q9Y239 953 aa13.98□□□□□ -0.17
CHPF2-202ENST00000465601 C17orf102A2RUQ5 167 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms