RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 A0A0G2JS52 829 aa8□□□□□ -1.13
USP48-206ENST00000464577 ESYT2A0FGR8 921 aa8□□□□□ -1.13
USP48-206ENST00000464577 PGRMC1O00264 195 aaKnown RBP8□□□□□ -1.13
USP48-206ENST00000464577 CAMTA2O94983 1202 aa8□□□□□ -1.13
USP48-206ENST00000464577 ZBTB48P10074 688 aaPredicted RBP8□□□□□ -1.13
USP48-206ENST00000464577 SLC8A1P32418 973 aa8□□□□□ -1.13
USP48-206ENST00000464577 CTNNA1P35221 906 aaKnown RBP8□□□□□ -1.13
USP48-206ENST00000464577 ATP2B2Q01814 1243 aa8□□□□□ -1.13
USP48-206ENST00000464577 BYSLQ13895 437 aaKnown RBP8□□□□□ -1.13
USP48-206ENST00000464577 TRADDQ15628 312 aa8□□□□□ -1.13
USP48-206ENST00000464577 ASIC2Q16515 512 aa8□□□□□ -1.13
USP48-206ENST00000464577 KIAA0753Q2KHM9 967 aa8□□□□□ -1.13
USP48-206ENST00000464577 TMEM119Q4V9L6 283 aa8□□□□□ -1.13
USP48-206ENST00000464577 FBXO33Q7Z6M2 555 aa8□□□□□ -1.13
USP48-206ENST00000464577 KLHL7Q8IXQ5 586 aa8□□□□□ -1.13
USP48-206ENST00000464577 ZC3H3Q8IXZ2 948 aaKnown RBP8□□□□□ -1.13
USP48-206ENST00000464577 MYOCDQ8IZQ8 938 aa8□□□□□ -1.13
USP48-206ENST00000464577 SEC14L1Q92503 715 aa8□□□□□ -1.13
USP48-206ENST00000464577 TBC1D5Q92609 795 aa8□□□□□ -1.13
USP48-206ENST00000464577 CENPTQ96BT3 561 aa8□□□□□ -1.13
USP48-206ENST00000464577 FAM84BQ96KN1 310 aaPredicted RBP8□□□□□ -1.13
USP48-206ENST00000464577 MTMR9Q96QG7 549 aa8□□□□□ -1.13
USP48-206ENST00000464577 TANGO6Q9C0B7 1094 aa8□□□□□ -1.13
USP48-206ENST00000464577 SLITRK6Q9H5Y7 841 aa8□□□□□ -1.13
USP48-206ENST00000464577 VEZTQ9HBM0 779 aa8□□□□□ -1.13
USP48-206ENST00000464577 POLD4Q9HCU8 107 aa8□□□□□ -1.13
USP48-206ENST00000464577 NLRC4Q9NPP4 1024 aa8□□□□□ -1.13
USP48-206ENST00000464577 SWAP70Q9UH65 585 aa8□□□□□ -1.13
USP48-206ENST00000464577 ODF2LQ9ULJ1 636 aa8□□□□□ -1.13
USP48-206ENST00000464577 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
USP48-206ENST00000464577 A0A087X0T9 212 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 DNM1LO00429 736 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 FAM228BP0C875 321 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 SCTRP47872 440 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 NAPAP54920 295 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 POLR2FP61218 127 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 KLHL30Q0D2K2 578 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 PDIA5Q14554 519 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 QPCTQ16769 361 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 TMEM266Q2M3C6 531 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 C12orf60Q5U649 245 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 GKAP1Q5VSY0 366 aaPredicted RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 TRIM59Q8IWR1 403 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 LRRC57Q8N9N7 239 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 RAPGEF5Q92565 580 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 CDK5RAP3Q96JB5 506 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.137e-7■■□□□ 12.6
USP48-206ENST00000464577 RAB34Q9BZG1 259 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 GANQ9H2C0 597 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 ATP6V0A4Q9HBG4 840 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 KIF13BQ9NQT8 1826 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 CCDC88AQ3V6T2 1871 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 BAZ2BQ9UIF8 2168 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 hCG_1984214I3L0E3 225 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 KCNK3O14649 394 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 MGRN1O60291 552 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 GSTA1P08263 222 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 EZRP15311 586 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 GCFC2P16383 781 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 DRD4P21917 467 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 DNA2P51530 1060 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 EIF3BP55884 814 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 EVA1CP58658 441 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 RAPGEF1Q13905 1077 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 CALCRLQ16602 461 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 TMC3Q7Z5M5 1100 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 FAM228AQ86W67 206 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 RASGEF1CQ8N431 466 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 ZNF713Q8N859 430 aaPredicted RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 CCT6BQ92526 530 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 TLCD1Q96CP7 247 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 FAM114A2Q9NRY5 505 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 HAUS2Q9NVX0 235 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 MCM9Q9NXL9 1143 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 FBXL5Q9UKA1 691 aa7.99□□□□□ -1.13
USP48-206ENST00000464577 TPX2Q9ULW0 747 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 PACSIN2Q9UNF0 486 aaPredicted RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 BZW2Q9Y6E2 419 aaKnown RBP7.99□□□□□ -1.13
USP48-206ENST00000464577 A0A0A6YYK5 440 aaPredicted RBP7.98□□□□□ -1.13
USP48-206ENST00000464577 SMCO2A6NFE2 343 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 F8VZ95 297 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 SART1O43290 800 aaKnown RBP7.98□□□□□ -1.13
USP48-206ENST00000464577 CEP104O60308 925 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 COASYQ13057 564 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 SF3B3Q15393 1217 aaKnown RBP7.98□□□□□ -1.13
USP48-206ENST00000464577 SPRED3Q2MJR0 410 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 SOGA3Q5TF21 947 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 TLDC1Q6P9B6 456 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
USP48-206ENST00000464577 BRINP3Q76B58 766 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 DYMQ7RTS9 669 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 OR2W6PQ8NHA6 318 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 CCDC26Q8TAB7 109 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 TBCKQ8TEA7 893 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 DDX12PQ92771 950 aa7.98□□□□□ -1.13
USP48-206ENST00000464577 N4BP2L2Q92802 583 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms