RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MAGEA1P43355 309 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 FNTAP49354 379 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 MRPL12P52815 198 aaKnown RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 EIF3BP55884 814 aaKnown RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC8A3P57103 927 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 NLRP5P59047 1200 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 C2orf54Q08AI8 447 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 PTPN21Q16825 1174 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 RRP12Q5JTH9 1297 aaKnown RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 IFIT1BQ5T764 474 aaKnown RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 WLSQ5T9L3 541 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 GKAP1Q5VSY0 366 aaPredicted RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 NAA35Q5VZE5 725 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 CREG2Q8IUH2 290 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 CACNA2D3Q8IZS8 1091 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 SPATA5Q8NB90 893 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF473Q8WTR7 871 aaKnown RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 LMBR1Q8WVP7 490 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 PBKQ96KB5 322 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 GDF3Q9NR23 364 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 DISC1Q9NRI5 854 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 HDAC6Q9UBN7 1215 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 PLAGL2Q9UPG8 496 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC4A4Q9Y6R1 1079 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 ALS2Q96Q42 1657 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 ANKRD36CQ5JPF3 1778 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 BCORQ6W2J9 1755 aa7.92□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC194A0A1B0GVG4 234 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 MACROD2A1Z1Q3 448 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 GMNCA6NCL1 334 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CFAP73A6NFT4 308 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC188H7C350 402 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 GNA14O95837 355 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 GSTA1P08263 222 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 SCG2P13521 617 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 HSPA9P38646 679 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 KIF11P52732 1056 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CTSWP56202 376 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 IRX1P78414 480 aaPredicted RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 GRIN1Q05586 938 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 LRRC63Q05C16 580 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 PPARAQ07869 468 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 PSMD2Q13200 908 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 SEPT2Q15019 361 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF174Q15697 407 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ZKSCAN8Q15776 578 aaPredicted RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 MAN2A1Q16706 1144 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC9C1Q4G0N8 1177 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 TMTC3Q6ZXV5 915 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 KRT28Q7Z3Y7 464 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 HOOK3Q86VS8 718 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 APLFQ8IW19 511 aaPredicted RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 IQCKQ8N0W5 287 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 MAGEB6Q8N7X4 407 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 TBC1D22AQ8WUA7 517 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ATRIPQ8WXE1 791 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 SGSM3Q96HU1 749 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CALR3Q96L12 384 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 CCT8L2Q96SF2 557 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ZSCAN10Q96SZ4 725 aaPredicted RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 PLCD4Q9BRC7 762 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 LZTS2Q9BRK4 669 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 LRRC1Q9BTT6 524 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 MYL10Q9BUA6 226 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 PUS3Q9BZE2 481 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 RAB34Q9BZG1 259 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 TTYH3Q9C0H2 523 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 NSRP1Q9H0G5 558 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ATP6V0A4Q9HBG4 840 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 PIH1D3Q9NQM4 214 aaKnown RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ODF2LQ9ULJ1 636 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 SUFUQ9UMX1 484 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 TNKSO95271 1327 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 GLI3P10071 1580 aa7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF142P52746 1687 aaPredicted RBP7.91□□□□□ -1.14
CLSTN1-204ENST00000464286 MEGF6O75095 1541 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 PVALEFA0A1B0GWK0 134 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 GSG1L2A8MUP6 293 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 BTNL10A8MVZ5 291 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 RBAK-RBAKDNI3L0D1 243 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC26A4O43511 780 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 PDE8AO60658 829 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 DNAJC8O75937 253 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 PAEPP09466 180 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 GUCY1A2P33402 732 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 SATB1Q01826 763 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 SEC23AQ15436 765 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CDC37Q16543 378 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 PFKFB3Q16875 520 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 LACTB2Q53H82 288 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 FBXW10Q5XX13 1052 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 HAUS3Q68CZ6 603 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 RCSD1Q6JBY9 416 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 TTI2Q6NXR4 508 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 NBPF10Q6P3W6 841 aaKnown RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 WDR59Q6PJI9 974 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms