RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 SMYD4Q8IYR2 804 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-206ENST00000463539 BMP2KQ9NSY1 1161 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-206ENST00000463539 EXOC1Q9NV70 894 aa21.23■□□□□ 0.99
CCDC78-206ENST00000463539 TLL2Q9Y6L7 1015 aa21.23■□□□□ 0.99
CCDC78-206ENST00000463539 SLC10A3P09131 477 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 MUTP22033 750 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 KRT76Q01546 638 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 DYMQ7RTS9 669 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 DDX12PQ92771 950 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 SAMM50Q9Y512 469 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 DNAJC25-GNG10A0A024R161 153 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 SPATA31C2B4DYI2 1134 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 KCNA2P16389 499 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 ERCC5P28715 1186 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-206ENST00000463539 SLC12A3P55017 1021 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 PSMC6P62333 389 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 FSTL1Q12841 308 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 NCAPHQ15003 741 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 GPBP1Q86WP2 473 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 LXNQ9BS40 222 aa21.22■□□□□ 0.99
CCDC78-206ENST00000463539 LCTP09848 1927 aa21.21■□□□□ 0.99
CCDC78-206ENST00000463539 PVALEFA0A1B0GWK0 134 aa21.21■□□□□ 0.99
CCDC78-206ENST00000463539 CD44P16070 742 aaKnown RBP21.21■□□□□ 0.99
CCDC78-206ENST00000463539 JAK3P52333 1124 aa21.21■□□□□ 0.99
CCDC78-206ENST00000463539 UNC13DQ70J99 1090 aa21.21■□□□□ 0.99
CCDC78-206ENST00000463539 GTPBP4Q9BZE4 634 aaKnown RBP21.21■□□□□ 0.99
CCDC78-206ENST00000463539 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
CCDC78-206ENST00000463539 WDR64B1ANS9 1081 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 PPP1R3GB7ZBB8 358 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 ADCY5O95622 1261 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 SFNP31947 248 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 FAM110CQ1W6H9 321 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 KLHL10Q6JEL2 608 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 SYT2Q8N9I0 419 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 GIMAP8Q8ND71 665 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 BANK1Q8NDB2 785 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 PPP1R9BQ96SB3 815 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 BHMT2Q9H2M3 363 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 ZCCHC17Q9NP64 241 aaKnown RBP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 GDAQ9Y2T3 454 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 NFASCO94856 1347 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 AP5Z1O43299 807 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 EYA4O95677 639 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 CCNE2O96020 404 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 P4HBP07237 508 aaKnown RBP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 IDEP14735 1019 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 CYP11B2P19099 503 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 ICAM3P32942 547 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 ZNF746Q6NUN9 644 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-206ENST00000463539 PDLIM2Q96JY6 352 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 FGD4Q96M96 766 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 NACC1Q96RE7 527 aa21.2■□□□□ 0.98
CCDC78-206ENST00000463539 KRT18P05783 430 aaKnown RBP21.19■□□□□ 0.98
CCDC78-206ENST00000463539 SEPT14Q6ZU15 432 aa21.19■□□□□ 0.98
CCDC78-206ENST00000463539 TRMT44Q8IYL2 757 aaKnown RBP21.19■□□□□ 0.98
CCDC78-206ENST00000463539 RDM1Q8NG50 284 aa21.19■□□□□ 0.98
CCDC78-206ENST00000463539 ENOX1Q8TC92 643 aaKnown RBP21.19■□□□□ 0.98
CCDC78-206ENST00000463539 PIGOQ8TEQ8 1089 aa21.19■□□□□ 0.98
CCDC78-206ENST00000463539 CCDC102AQ96A19 550 aa21.19■□□□□ 0.98
CCDC78-206ENST00000463539 JPH1Q9HDC5 661 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-206ENST00000463539 WRAP73Q9P2S5 460 aaPredicted RBP21.19■□□□□ 0.98
CCDC78-206ENST00000463539 IVNS1ABPQ9Y6Y0 642 aa21.19■□□□□ 0.98
CCDC78-206ENST00000463539 SYNRGQ9UMZ2 1314 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 STIM1Q13586 685 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 DNAJC19Q96DA6 116 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 ZSWIM4Q9H7M6 989 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 CTNND2Q9UQB3 1225 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 LOC102724159A0A0B4J2E5 919 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 TMEM88BA6NKF7 163 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 STRNO43815 780 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 INHBEP58166 350 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 PWP2Q15269 919 aaKnown RBP21.18■□□□□ 0.98
CCDC78-206ENST00000463539 SARM1Q6SZW1 724 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 SMAP1Q8IYB5 467 aaPredicted RBP21.18■□□□□ 0.98
CCDC78-206ENST00000463539 ABRAQ8N0Z2 381 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 ADSSL1Q8N142 457 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 SENP7Q9BQF6 1050 aa21.18■□□□□ 0.98
CCDC78-206ENST00000463539 ADORA2AP29274 412 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 PRCPP42785 496 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 QARSP47897 775 aaKnown RBP21.17■□□□□ 0.98
CCDC78-206ENST00000463539 PAK1Q13153 545 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 TAF1CQ15572 869 aaPredicted RBP21.17■□□□□ 0.98
CCDC78-206ENST00000463539 ARSHQ5FYA8 562 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 TRIM5Q9C035 493 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 SLC9A2Q9UBY0 812 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 MAPK8IP1Q9UQF2 711 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 NFE2L3Q9Y4A8 694 aa21.17■□□□□ 0.98
CCDC78-206ENST00000463539 FAM155AB1AL88 458 aaPredicted RBP21.16■□□□□ 0.98
CCDC78-206ENST00000463539 TOMM70O94826 608 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 STK4Q13043 487 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 IFNL1Q8IU54 200 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 CCDC65Q8IXS2 484 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 MED15Q96RN5 788 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 PANK4Q9NVE7 773 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 PCDHA10Q9Y5I2 948 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
CCDC78-206ENST00000463539 NPHP3-ACAD11A0A0J9YXS1 232 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 MAPK4P31152 587 aa21.15■□□□□ 0.98
CCDC78-206ENST00000463539 STX17P56962 302 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms