RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ELP1O95163 1332 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 BACH1O14867 736 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 KPNA6O60684 536 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 PSMD10O75832 226 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 BAG4O95429 457 aaKnown RBP22.88■■□□□ 1.25
NUP43-205ENST00000463048 MARK3P27448 753 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 TXKP42681 527 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 TRAPPC10P48553 1259 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
NUP43-205ENST00000463048 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
NUP43-205ENST00000463048 KAT2BQ92831 832 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 GLG1Q92896 1179 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 RIT2Q99578 217 aa22.88■■□□□ 1.25
NUP43-205ENST00000463048 A0A0U1RQG5 324 aaPredicted RBP22.87■■□□□ 1.25
NUP43-205ENST00000463048 CABYRO75952 493 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 PSEN2P49810 448 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 KRT76Q01546 638 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 ITGA7Q13683 1181 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 NBPF20Q3BBV1 942 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 RILPL1Q5EBL4 403 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 TRMT1LQ7Z2T5 733 aaKnown RBP22.87■■□□□ 1.25
NUP43-205ENST00000463048 BRAPQ7Z569 592 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 C16orf70Q9BSU1 422 aa22.87■■□□□ 1.25
NUP43-205ENST00000463048 DAXXQ9UER7 740 aaPredicted RBP22.87■■□□□ 1.25
NUP43-205ENST00000463048 GRIN2DO15399 1336 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 PQBP1O60828 265 aaKnown RBP22.86■■□□□ 1.25
NUP43-205ENST00000463048 HOXD8P13378 290 aaPredicted RBP22.86■■□□□ 1.25
NUP43-205ENST00000463048 RTP1P59025 263 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 MFSD10Q14728 455 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 KIAA0753Q2KHM9 967 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 TRIM60Q495X7 471 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 NCAPH2Q6IBW4 605 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 ZNF746Q6NUN9 644 aaPredicted RBP22.86■■□□□ 1.25
NUP43-205ENST00000463048 MIER3Q7Z3K6 550 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 DPF3Q92784 378 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 FAM20AQ96MK3 541 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 PCYT2Q99447 389 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 PCDH10Q9P2E7 1040 aa22.86■■□□□ 1.25
NUP43-205ENST00000463048 H3BRB1 525 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 OR52Z1P0C646 297 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 SUPT20HL2P0C7V6 817 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 ZSCAN22P10073 491 aaPredicted RBP22.85■■□□□ 1.25
NUP43-205ENST00000463048 CEBPZQ03701 1054 aaKnown RBP22.85■■□□□ 1.25
NUP43-205ENST00000463048 SWSAP1Q6NVH7 229 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 MIS18BP1Q6P0N0 1132 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 ABHD15Q6UXT9 468 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 SLFN12Q8IYM2 578 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 HTATIP2Q9BUP3 242 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 FTOQ9C0B1 505 aaKnown RBP eCLIP22.85■■□□□ 1.25
NUP43-205ENST00000463048 TUT1Q9H6E5 874 aaKnown RBP22.85■■□□□ 1.25
NUP43-205ENST00000463048 AZI2Q9H6S1 392 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 DISC1Q9NRI5 854 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 VAV3Q9UKW4 847 aa22.85■■□□□ 1.25
NUP43-205ENST00000463048 ARVCFO00192 962 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 TBX3O15119 743 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 F2P00734 622 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 PTGDRQ13258 359 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 CCDC60Q8IWA6 550 aaPredicted RBP22.84■■□□□ 1.25
NUP43-205ENST00000463048 C7orf61Q8IZ16 206 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 MTMR9Q96QG7 549 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 TTC12Q9H892 705 aaPredicted RBP22.84■■□□□ 1.25
NUP43-205ENST00000463048 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.84■■□□□ 1.25
NUP43-205ENST00000463048 PCDHA12Q9UN75 941 aa22.84■■□□□ 1.25
NUP43-205ENST00000463048 ALPK3Q96L96 1907 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 WDR64B1ANS9 1081 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 EML1O00423 815 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 PSAPP07602 524 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 TLE2Q04725 743 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 C7orf31Q8N865 590 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 KATNAL1Q9BW62 490 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 RNPEPQ9H4A4 650 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 ZNF302Q9NR11 478 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 GABBR1Q9UBS5 961 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 ZNF215Q9UL58 517 aaPredicted RBP22.83■■□□□ 1.25
NUP43-205ENST00000463048 PCDHA10Q9Y5I2 948 aa22.83■■□□□ 1.25
NUP43-205ENST00000463048 ATG7O95352 703 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 F13A1P00488 732 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 TECP42680 631 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 RGS19P49795 217 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 STAT5BP51692 787 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 JAK3P52333 1124 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 FAM160B1Q5W0V3 765 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 CKAP2LQ8IYA6 745 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 SMAP1Q8IYB5 467 aaPredicted RBP22.82■■□□□ 1.24
NUP43-205ENST00000463048 C4orf32Q8N8J7 132 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 BANK1Q8NDB2 785 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 TRPV6Q9H1D0 765 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 SMARCAD1Q9H4L7 1026 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 ZSCAN16Q9H4T2 348 aaPredicted RBP22.82■■□□□ 1.24
NUP43-205ENST00000463048 HDAC6Q9UBN7 1215 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 RBM19Q9Y4C8 960 aaKnown RBP22.82■■□□□ 1.24
NUP43-205ENST00000463048 CLIC4Q9Y696 253 aa22.82■■□□□ 1.24
NUP43-205ENST00000463048 POTEMA6NI47 508 aa22.81■■□□□ 1.24
NUP43-205ENST00000463048 EVI5O60447 810 aa22.81■■□□□ 1.24
NUP43-205ENST00000463048 LGR5O75473 907 aa22.81■■□□□ 1.24
NUP43-205ENST00000463048 PPP2R5CQ13362 524 aa22.81■■□□□ 1.24
NUP43-205ENST00000463048 ORC2Q13416 577 aaPredicted RBP22.81■■□□□ 1.24
NUP43-205ENST00000463048 SF3A1Q15459 793 aaKnown RBP22.81■■□□□ 1.24
NUP43-205ENST00000463048 UGCGQ16739 394 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms