RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 HOOK1Q9UJC3 728 aaKnown RBP20.23■□□□□ 0.83
ATPAF2-202ENST00000462733 SYNGAP1Q96PV0 1343 aa20.23■□□□□ 0.83
ATPAF2-202ENST00000462733 CENPFP49454 3210 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 RIOK3O14730 519 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 CYP2C19P33261 490 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 SETQ01105 290 aaPredicted RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 GNPTABQ3T906 1256 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 C4orf32Q8N8J7 132 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 KRI1Q8N9T8 703 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 TRIB2Q92519 343 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 KCNH7Q9NS40 1196 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 KIF2AO00139 706 aaPredicted RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 MSH4O15457 936 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 BMP15O95972 392 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 OR52Z1P0C646 297 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 SKILP12757 684 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 CCZ1BP86790 482 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 CCZ1P86791 482 aaPredicted RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 GPRASP2Q96D09 838 aa20.22■□□□□ 0.83
ATPAF2-202ENST00000462733 ELNP15502 786 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 LBX1P52954 281 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 SEMA3FQ13275 785 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 IRF5Q13568 498 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 TPD52L1Q16890 204 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 PRAMEF19Q5SWL8 479 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 ZNF577Q9BSK1 485 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 PDGFCQ9NRA1 345 aa20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 ZHX1Q9UKY1 873 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-202ENST00000462733 NRDCO43847 1150 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 TNNT1P13805 278 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 TXKP42681 527 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 NCAPHQ15003 741 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 ETNPPLQ8TBG4 499 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 HAS1Q92839 578 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 MTMR9Q96QG7 549 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 AGO4Q9HCK5 861 aaKnown RBP20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 VTA1Q9NP79 307 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 KCNMB3Q9NPA1 279 aa20.2■□□□□ 0.82
ATPAF2-202ENST00000462733 DOCK5Q9H7D0 1870 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 CBFA2T2O43439 604 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 ADCY3O60266 1144 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 CTCFP49711 727 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 ERCC4Q92889 916 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 C16orf45Q96MC5 204 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 KATNBL1Q9H079 304 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 KCNH3Q9ULD8 1083 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 HTTP42858 3142 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 SPATA31C2B4DYI2 1134 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 LAD1O00515 517 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 ATP9AO75110 1047 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 PRMT2P55345 433 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 MYL5Q02045 173 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 MFSD14CQ5VZR4 134 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 KRBA2Q6ZNG9 492 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
ATPAF2-202ENST00000462733 A0A087WWV3 80 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 VWA3AA6NCI4 1184 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 IPO5O00410 1097 aaKnown RBP20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 TBX3O15119 743 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 MAFGO15525 162 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 SORBS3O60504 671 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 ICAM3P32942 547 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 IL17AQ16552 155 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 TAPT1Q6NXT6 567 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 DTHD1Q6ZMT9 781 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 NYAP1Q6ZVC0 841 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 FILIP1Q7Z7B0 1213 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 TRMT44Q8IYL2 757 aaKnown RBP20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 SLFN12Q8IYM2 578 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 FAM20AQ96MK3 541 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 XPO4Q9C0E2 1151 aaKnown RBP20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
ATPAF2-202ENST00000462733 DDX39AO00148 427 aaKnown RBP20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 SMC2O95347 1197 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ARIH2O95376 493 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 IGHA2P01877 340 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 TUBB4AP04350 444 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ADCYAP1R1P41586 468 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 TECP42680 631 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 SP2Q02086 613 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 GRIN1Q05586 938 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 TRIM32Q13049 653 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ITGB3BPQ13352 177 aaPredicted RBP20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 LRCH2Q5VUJ6 765 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ARL6IP4Q66PJ3 421 aaKnown RBP20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ZNF710Q8N1W2 664 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 SLC5A5Q92911 643 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 IFNKQ9P0W0 207 aa20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 FBXO2Q9UK22 296 aaPredicted RBP20.17■□□□□ 0.82
ATPAF2-202ENST00000462733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.16■□□□□ 0.82
ATPAF2-202ENST00000462733 BIN1O00499 593 aa20.16■□□□□ 0.82
ATPAF2-202ENST00000462733 PRPHP41219 470 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms