RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 MMS19Q96T76 1030 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 NUDT12Q9BQG2 462 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 GOLGA6AQ9NYA3 693 aa13.27□□□□□ -0.28
TNRC6A-204ENST00000462400 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 PLCG1P19174 1290 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 MCM3P25205 808 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 IRAK1P51617 712 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 DPYDQ12882 1025 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 RRAGBQ5VZM2 374 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 KANK3Q6NY19 840 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 SLC30A10Q6XR72 485 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 CDKAL1Q5VV42 579 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 SPATA20Q8TB22 786 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 HAS1Q92839 578 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 MMTAG2Q9BU76 263 aaKnown RBP13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 TANGO6Q9C0B7 1094 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 CXorf56Q9H5V9 222 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 SH2D4AQ9H788 454 aa13.27□□□□□ -0.29
TNRC6A-204ENST00000462400 AGPSO00116 658 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 LAD1O00515 517 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 MARCH6O60337 910 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 CTNND1O60716 968 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 MYBL2P10244 700 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 FECHP22830 423 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 PRPHP41219 470 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 SELENOOQ9BVL4 669 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 ADM5C9JUS6 153 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 N4BP3O15049 544 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 KCNV1Q6PIU1 500 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 ANKRD20A12PQ8NF67 263 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 WNK4Q96J92 1243 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 CHP1Q99653 195 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 VPS16Q9H269 839 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
TNRC6A-204ENST00000462400 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 ITIH6Q6UXX5 1313 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 SPDYE3A6NKU9 549 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 KRT9P35527 623 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 MAP2K2P36507 400 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 STAT3P40763 770 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 MMP14P50281 582 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 ARHGAP4P98171 946 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 PRR16Q569H4 304 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 TFR2Q9UP52 801 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 SAR1BQ9Y6B6 198 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 PSEN1P49768 467 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 TTC19Q6DKK2 380 aaPredicted RBP13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 CAPS2Q9BXY5 557 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 SYNPO2Q9UMS6 1093 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
TNRC6A-204ENST00000462400 FAM86B1E9PN63 330 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 FLOT1O75955 427 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 FAM86B2P0C5J1 330 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 VCAM1P19320 739 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 KRT31Q15323 416 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 ECM1Q16610 540 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 PPP4R3AQ6IN85 833 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 SAMM50Q9Y512 469 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 NDUFA10O95299 355 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 HMGCS2P54868 508 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 GNGT1P63211 74 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 RPAP3Q9H6T3 665 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 GDAQ9Y2T3 454 aa13.24□□□□□ -0.29
TNRC6A-204ENST00000462400 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms