RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KPNA1P52294 538 aaPredicted RBP4.13□□□□□ -1.75
HDAC6-212ENST00000461608 HK2P52789 917 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 SNX17Q15036 470 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ZNF174Q15697 407 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 SLC14A2Q15849 920 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 BRDTQ58F21 947 aaPredicted RBP4.13□□□□□ -1.75
HDAC6-212ENST00000461608 HSP90AB2PQ58FF8 381 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 EMC4Q5J8M3 183 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 HABP4Q5JVS0 413 aaKnown RBP4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ABHD17CQ6PCB6 329 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 EP400NLQ6ZTU2 488 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 CEP68Q76N32 757 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 OTOP3Q7RTS5 596 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 GGNQ86UU5 652 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ZZZ3Q8IYH5 903 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 LZTR1Q8N653 840 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 TMEM52Q8NDY8 209 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 CCDC136Q96JN2 1154 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 JMJD8Q96S16 334 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 MENTQ9BUN1 341 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 CDIP1Q9H305 208 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ADAMTS10Q9H324 1103 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 CATSPERZQ9NTU4 200 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 SLC5A4Q9NY91 659 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 KLHL42Q9P2K6 505 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ACSL6Q9UKU0 697 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 ZNF652Q9Y2D9 606 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 PHLDB1Q86UU1 1377 aa4.13□□□□□ -1.75
HDAC6-212ENST00000461608 PTPDC1A2A3K4 754 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 C22orf46C9J442 243 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 ZNF561-AS1K7EIQ3 104 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 TRAF5O00463 557 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SRGAP3O43295 1099 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SEMA7AO75326 666 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 FKBP9O95302 570 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 FPR2P25090 351 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 DNM2P50570 870 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SESN3P58005 492 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 TMPRSS15P98073 1019 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SPATS1Q496A3 300 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 ATP13A4Q4VNC1 1196 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 GPR158Q5T848 1215 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 IQSEC1Q6DN90 963 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 ZPBP2Q6X784 338 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 FKBP9P1Q75LS8 142 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 STRA8Q7Z7C7 330 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 CISD2Q8N5K1 135 aaKnown RBP4.12□□□□□ -1.75
HDAC6-212ENST00000461608 UHMK1Q8TAS1 419 aaKnown RBP4.12□□□□□ -1.75
HDAC6-212ENST00000461608 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SEC14L1Q92503 715 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 MTA3Q9BTC8 594 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 FAM126AQ9BYI3 521 aaPredicted RBP4.12□□□□□ -1.75
HDAC6-212ENST00000461608 RNF32Q9H0A6 362 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 AP5M1Q9H0R1 490 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SLC6A17Q9H1V8 727 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 PCIF1Q9H4Z3 704 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 C19orf44Q9H6X5 657 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 SLC6A20Q9NP91 592 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 CRTAC1Q9NQ79 661 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 IMPACTQ9P2X3 320 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 GULP1Q9UBP9 304 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 EBF1Q9UH73 591 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 TCEAL9Q9UHQ7 104 aa4.12□□□□□ -1.75
HDAC6-212ENST00000461608 ZNF891A8MT65 544 aaPredicted RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 NEMP1O14524 444 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 SUV39H1O43463 412 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 MARCH6O60337 910 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 CLASP2O75122 1294 aaKnown RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 EFEMP2O95967 443 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 HPXP02790 462 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 ADCYAP1R1P41586 468 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 CEBPAP49715 358 aaPredicted RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 PHC1P78364 1004 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 IRF9Q00978 393 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 TMEM62Q0P6H9 643 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 TEX2Q8IWB9 1127 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 TRIM48Q8IWZ4 208 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 MARCH10Q8NA82 808 aaPredicted RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 NUP43Q8NFH3 380 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 PLEKHO2Q8TD55 490 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 JDP2Q8WYK2 163 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 GPR20Q99678 358 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 PDGFDQ9GZP0 370 aaPredicted RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 EMC7Q9NPA0 242 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 BTG4Q9NY30 223 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 USP36Q9P275 1121 aaKnown RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 PPARGC1AQ9UBK2 798 aaKnown RBP4.11□□□□□ -1.75
HDAC6-212ENST00000461608 FBXL7Q9UJT9 491 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 CBLCQ9ULV8 474 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 SRPK3Q9UPE1 567 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 RWDD3Q9Y3V2 267 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 SPO11Q9Y5K1 396 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 WASHC2CQ9Y4E1 1318 aa4.11□□□□□ -1.75
HDAC6-212ENST00000461608 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.1□□□□□ -1.75
HDAC6-212ENST00000461608 HGSO14964 777 aaPredicted RBP4.1□□□□□ -1.75
HDAC6-212ENST00000461608 ALDH1L1O75891 902 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 ZBTB7AO95365 584 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 FUCA1P04066 466 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 CYP17A1P05093 508 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 PDE6AP16499 860 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms