RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 DBF4BQ8NFT6 615 aa20.26■□□□□ 0.83
COL1A2-202ENST00000461525 LMBR1Q8WVP7 490 aa20.26■□□□□ 0.83
COL1A2-202ENST00000461525 ATXN2LQ8WWM7 1075 aaKnown RBP20.26■□□□□ 0.83
COL1A2-202ENST00000461525 SEPT1Q8WYJ6 367 aa20.26■□□□□ 0.83
COL1A2-202ENST00000461525 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
COL1A2-202ENST00000461525 TTC28Q96AY4 2481 aa20.26■□□□□ 0.83
COL1A2-202ENST00000461525 GBF1Q92538 1859 aa20.25■□□□□ 0.83
COL1A2-202ENST00000461525 LCHNA4D1U4 455 aa20.25■□□□□ 0.83
COL1A2-202ENST00000461525 EPOPA6NHQ4 379 aa20.25■□□□□ 0.83
COL1A2-202ENST00000461525 RAD9AQ99638 391 aa20.25■□□□□ 0.83
COL1A2-202ENST00000461525 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
COL1A2-202ENST00000461525 NRCAMQ92823 1304 aa20.25■□□□□ 0.83
COL1A2-202ENST00000461525 MYH7BA7E2Y1 1941 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 GSTTP1A0A1W2PQM5 241 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 RBAK-RBAKDNI3L0D1 243 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 STXBP3O00186 592 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 FOSP01100 380 aaPredicted RBP20.24■□□□□ 0.83
COL1A2-202ENST00000461525 CDC27P30260 824 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 ADAM17P78536 824 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 PLEKHG4Q58EX7 1191 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 FAM117BQ6P1L5 589 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 SEPT8Q92599 483 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 GLG1Q92896 1179 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 JAKMIP1Q96N16 626 aaKnown RBP20.24■□□□□ 0.83
COL1A2-202ENST00000461525 FAM217BQ9NTX9 383 aaPredicted RBP20.24■□□□□ 0.83
COL1A2-202ENST00000461525 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 ERAP1Q9NZ08 941 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 MTCH2Q9Y6C9 303 aa20.24■□□□□ 0.83
COL1A2-202ENST00000461525 TRIP12Q14669 1992 aaPredicted RBP20.23■□□□□ 0.83
COL1A2-202ENST00000461525 CCDC196A0A1B0GTZ2 297 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 SMCO2A6NFE2 343 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 AMHP03971 560 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 CPA1P15085 419 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 POU3F3P20264 500 aaPredicted RBP20.23■□□□□ 0.83
COL1A2-202ENST00000461525 MARK3P27448 753 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL1A2-202ENST00000461525 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 SPRED2Q7Z698 418 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 KCNB2Q92953 911 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 PGBD1Q96JS3 809 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 MXRA8Q9BRK3 442 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 ANO3Q9BYT9 981 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 GLT8D2Q9H1C3 349 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 JPH1Q9HDC5 661 aaPredicted RBP20.23■□□□□ 0.83
COL1A2-202ENST00000461525 KCNH7Q9NS40 1196 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 PRUNE2Q8WUY3 3088 aa20.23■□□□□ 0.83
COL1A2-202ENST00000461525 HSPA4P34932 840 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 MRPS5P82675 430 aaKnown RBP20.22■□□□□ 0.83
COL1A2-202ENST00000461525 APOBRQ0VD83 1088 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 AP3B2Q13367 1082 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 SKIV2LQ15477 1246 aaKnown RBP20.22■□□□□ 0.83
COL1A2-202ENST00000461525 TAF2Q6P1X5 1199 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 BLOC1S2Q6QNY1 142 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL1A2-202ENST00000461525 MYOCDQ8IZQ8 938 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 ASB2Q96Q27 587 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 SMARCAD1Q9H4L7 1026 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 SNX14Q9Y5W7 946 aa20.22■□□□□ 0.83
COL1A2-202ENST00000461525 ADD1P35611 737 aaKnown RBP20.21■□□□□ 0.83
COL1A2-202ENST00000461525 GRB10Q13322 594 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 MKRN4PQ13434 485 aaPredicted RBP20.21■□□□□ 0.83
COL1A2-202ENST00000461525 GRIK4Q16099 956 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 CEP55Q53EZ4 464 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 Q6ZUG5 572 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 CYP2W1Q8TAV3 490 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 BRF1Q92994 677 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 SLC9A2Q9UBY0 812 aa20.21■□□□□ 0.83
COL1A2-202ENST00000461525 LINC01553A4QN01 128 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 REC8O95072 547 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 SREBF1P36956 1147 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 PFKFB3Q16875 520 aaPredicted RBP20.2■□□□□ 0.82
COL1A2-202ENST00000461525 FAM26DQ5JW98 314 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 KRT40Q6A162 431 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 RUFY4Q6ZNE9 571 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 RSPH3Q86UC2 560 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 TGS1Q96RS0 853 aaKnown RBP20.2■□□□□ 0.82
COL1A2-202ENST00000461525 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 AZI2Q9H6S1 392 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 TMEM260Q9NX78 707 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 TUBE1Q9UJT0 475 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 MTUS1Q9ULD2 1270 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 INSL6Q9Y581 213 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 CHD7Q9P2D1 2997 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 NFASCO94856 1347 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 VCANP13611 3396 aa20.2■□□□□ 0.82
COL1A2-202ENST00000461525 ARP10275 920 aa20.19■□□□□ 0.82
COL1A2-202ENST00000461525 SCG2P13521 617 aa20.19■□□□□ 0.82
COL1A2-202ENST00000461525 CLK2P49760 499 aaKnown RBP20.19■□□□□ 0.82
COL1A2-202ENST00000461525 RPAINQ86UA6 219 aa20.19■□□□□ 0.82
COL1A2-202ENST00000461525 GDPD5Q8WTR4 605 aa20.19■□□□□ 0.82
COL1A2-202ENST00000461525 APBB2Q92870 758 aa20.19■□□□□ 0.82
COL1A2-202ENST00000461525 IFIH1Q9BYX4 1025 aaKnown RBP20.19■□□□□ 0.82
COL1A2-202ENST00000461525 MBLAC1A4D2B0 266 aaPredicted RBP20.18■□□□□ 0.82
COL1A2-202ENST00000461525 RPS6KB1P23443 525 aa20.18■□□□□ 0.82
COL1A2-202ENST00000461525 PSMA5P28066 241 aa20.18■□□□□ 0.82
COL1A2-202ENST00000461525 ZNF76P36508 570 aa20.18■□□□□ 0.82
COL1A2-202ENST00000461525 ACTR2P61160 394 aa20.18■□□□□ 0.82
COL1A2-202ENST00000461525 ERVK-21P61565 698 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms