RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 TPD52L1Q16890 204 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 NEK9Q8TD19 979 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
IFT88-204ENST00000461115 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 SEMA6BQ9H3T3 888 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 PICK1Q9NRD5 415 aa12.11□□□□□ -0.47
IFT88-204ENST00000461115 EML1O00423 815 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 NFIBO00712 420 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 ARHGAP6O43182 974 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 SLITRK3O94933 977 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 ZNF76P36508 570 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 STAT3P40763 770 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 COASYQ13057 564 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 TRIM14Q14142 442 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 COG2Q14746 738 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 EIF2AK1Q9BQI3 630 aaKnown RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
IFT88-204ENST00000461115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.1□□□□□ -0.47
IFT88-204ENST00000461115 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
IFT88-204ENST00000461115 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 LGALS16A8MUM7 142 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
IFT88-204ENST00000461115 LYPLA2O95372 231 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 ITGB5P18084 799 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 MARSP56192 900 aaKnown RBP12.09□□□□□ -0.47
IFT88-204ENST00000461115 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 MUM1L1Q5H9M0 696 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 FAM26FQ5R3K3 315 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
IFT88-204ENST00000461115 EPM2AIP1Q7L775 607 aaPredicted RBP12.09□□□□□ -0.47
IFT88-204ENST00000461115 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 ZC3H15Q8WU90 426 aaKnown RBP12.09□□□□□ -0.47
IFT88-204ENST00000461115 IQCDQ96DY2 449 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 PANK4Q9NVE7 773 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
IFT88-204ENST00000461115 KIF2AO00139 706 aaPredicted RBP12.08□□□□□ -0.48
IFT88-204ENST00000461115 N4BP3O15049 544 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 CCP110O43303 1012 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 PPP1R37O75864 691 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 DDNO94850 711 aaPredicted RBP12.08□□□□□ -0.48
IFT88-204ENST00000461115 KIF20AO95235 890 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 FGFR1OPO95684 399 aaKnown RBP12.08□□□□□ -0.48
IFT88-204ENST00000461115 ARP10275 920 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 DNM2P50570 870 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
IFT88-204ENST00000461115 DGKZQ13574 1117 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 GIT2Q14161 759 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 FIGNQ5HY92 759 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 GPBP1Q86WP2 473 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 MYOCDQ8IZQ8 938 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 RETREG2Q8NC44 543 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 RAVER2Q9HCJ3 691 aaKnown RBP12.08□□□□□ -0.48
IFT88-204ENST00000461115 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
IFT88-204ENST00000461115 AKR1B15C9JRZ8 316 aaPredicted RBP12.07□□□□□ -0.48
IFT88-204ENST00000461115 IPO5O00410 1097 aaKnown RBP12.07□□□□□ -0.48
IFT88-204ENST00000461115 MAFGO15525 162 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 MFAP3LO75121 409 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 GYPCP04921 128 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 ALAS1P13196 640 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 HMGCS2P54868 508 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 PSMC6P62333 389 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 RPS6P62753 249 aaKnown RBP12.07□□□□□ -0.48
IFT88-204ENST00000461115 PGM5Q15124 567 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 EDRF1Q3B7T1 1238 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 MIIPQ5JXC2 388 aa12.07□□□□□ -0.48
IFT88-204ENST00000461115 LBX2Q6XYB7 198 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms