RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 SNX21Q969T3 373 aa23.38■■□□□ 1.33
RPUSD3-210ENST00000460909 TUT1Q9H6E5 874 aaKnown RBP23.38■■□□□ 1.33
RPUSD3-210ENST00000460909 TBC1D22BQ9NU19 505 aa23.38■■□□□ 1.33
RPUSD3-210ENST00000460909 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
RPUSD3-210ENST00000460909 SLC37A4O43826 429 aa23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 ITGB8P26012 769 aa23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 SAFBQ15424 915 aaKnown RBP eCLIP23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 PCYT2Q99447 389 aa23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 FOXP1Q9H334 677 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 TRMT13Q9NUP7 481 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 TMEM39AQ9NV64 488 aa23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-210ENST00000460909 LGR5O75473 907 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 CHMP4BP1P59074 171 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 FAM47CQ5HY64 1035 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 UTP14CQ5TAP6 766 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 ETNPPLQ8TBG4 499 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 RIT2Q99578 217 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 DDX25Q9UHL0 483 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 GTF2IRD1Q9UHL9 959 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 SMC3Q9UQE7 1217 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 KIF3AQ9Y496 699 aa23.36■■□□□ 1.33
RPUSD3-210ENST00000460909 IGKV6D-21A0A0A0MT36 114 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 K7ELQ4 463 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 DDX39AO00148 427 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 WNT7AO00755 349 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 TLR3O15455 904 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 GCFC2P16383 781 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 ABHD15Q6UXT9 468 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 GJA10Q969M2 543 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 CTAGE1Q96RT6 745 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 KCNMB3Q9NPA1 279 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 HDAC6Q9UBN7 1215 aa23.35■■□□□ 1.33
RPUSD3-210ENST00000460909 EMSYQ7Z589 1322 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 KIF28PB7ZC32 967 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 CCNT1O60563 726 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 PSMD10O75832 226 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 HOXC8P31273 242 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 HIC1Q14526 733 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 GDF6Q6KF10 455 aaPredicted RBP23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 ZNF746Q6NUN9 644 aaPredicted RBP23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 C7orf31Q8N865 590 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 NAP1L4Q99733 375 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 GDF15Q99988 308 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 PRO3102Q9H379 93 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 RNPEPQ9H4A4 650 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 PRKAG2Q9UGJ0 569 aa23.34■■□□□ 1.33
RPUSD3-210ENST00000460909 U2AF2P26368 475 aaKnown RBP eCLIP23.33■■□□□ 1.33
RPUSD3-210ENST00000460909 B3GNT9Q6UX72 402 aa23.33■■□□□ 1.33
RPUSD3-210ENST00000460909 SMARCAD1Q9H4L7 1026 aa23.33■■□□□ 1.33
RPUSD3-210ENST00000460909 ZNF215Q9UL58 517 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-210ENST00000460909 TRIP12Q14669 1992 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 WDR81Q562E7 1941 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 SUPT20HL2P0C7V6 817 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 MAGEA10P43363 369 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 KRT76Q01546 638 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 LRCH2Q5VUJ6 765 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 NOSTRINQ8IVI9 506 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 HAS1Q92839 578 aa23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 INTS4Q96HW7 963 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-210ENST00000460909 GAS7O60861 476 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 TIMP1P01033 207 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 SMIM10L2AP0DMW4 78 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 SMIM10L2BP0DMW5 78 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 CYP2C9P11712 490 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 PTGISQ16647 500 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 PLPPR4Q7Z2D5 763 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 CCDC60Q8IWA6 550 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 SMAP1Q8IYB5 467 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 GLG1Q92896 1179 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 FAM20AQ96MK3 541 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 NOC4LQ9BVI4 516 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 ERAP1Q9NZ08 941 aa23.31■■□□□ 1.32
RPUSD3-210ENST00000460909 TBX3O15119 743 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 RAG1P15918 1043 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 ZNF200P98182 395 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 MDM2Q00987 491 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 AFAP1L1Q8TED9 768 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 BADQ92934 168 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 TEKT3Q9BXF9 490 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 UNC45AQ9H3U1 944 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 PCDHA10Q9Y5I2 948 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 UMODL1Q5DID0 1318 aa23.3■■□□□ 1.32
RPUSD3-210ENST00000460909 MARK3P27448 753 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 STAT5BP51692 787 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 ADAM17P78536 824 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 LARP1BQ659C4 914 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 MIS18BP1Q6P0N0 1132 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 CHRDL2Q6WN34 429 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 AZI2Q9H6S1 392 aa23.29■■□□□ 1.32
RPUSD3-210ENST00000460909 WDR64B1ANS9 1081 aa23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 BMP8BP34820 402 aa23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 SWSAP1Q6NVH7 229 aa23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 DHX38Q92620 1227 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 LBHD1Q9BQE6 289 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 PPP1R12CQ9BZL4 782 aa23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 HIPK3Q9H422 1215 aa23.28■■□□□ 1.32
RPUSD3-210ENST00000460909 DISC1Q9NRI5 854 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms