RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SMAD5Q99717 465 aaKnown RBP7.42□□□□□ -1.22
CCDC50-203ENST00000460064 ASPSCR1Q9BZE9 553 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 MYOTQ9UBF9 498 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
CCDC50-203ENST00000460064 TGM5O43548 720 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 HYAL3O43820 417 aaPredicted RBP7.41□□□□□ -1.22
CCDC50-203ENST00000460064 CYBBP04839 570 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 SDHBP21912 280 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 TUSC3Q13454 348 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 TTF1Q15361 905 aaPredicted RBP7.41□□□□□ -1.22
CCDC50-203ENST00000460064 BTBD8Q5XKL5 378 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 FSTL4Q6MZW2 842 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 PAQR3Q6TCH7 311 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 PHOSPHO1Q8TCT1 267 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 CLEC4DQ8WXI8 215 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 PEX11GQ96HA9 241 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 RNF32Q9H0A6 362 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 TOMM22Q9NS69 142 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 RIC8BQ9NVN3 520 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 ASH2LQ9UBL3 628 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 TRHDEQ9UKU6 1024 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 PCDHB4Q9Y5E5 795 aa7.41□□□□□ -1.22
CCDC50-203ENST00000460064 NUDT19A8MXV4 375 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 SRGAP3O43295 1099 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 MPOP05164 745 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 EPHA5P54756 1037 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 SESN3P58005 492 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 SYDE2Q5VT97 1194 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.4□□□□□ -1.22
CCDC50-203ENST00000460064 DLG3Q92796 817 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 ACSS2Q9NR19 701 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 KCNH7Q9NS40 1196 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 TCEAL9Q9UHQ7 104 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 YBX2Q9Y2T7 364 aaKnown RBP7.4□□□□□ -1.22
CCDC50-203ENST00000460064 THRAP3Q9Y2W1 955 aaKnown RBP7.4□□□□□ -1.22
CCDC50-203ENST00000460064 TELO2Q9Y4R8 837 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 B3GALT1Q9Y5Z6 326 aa7.4□□□□□ -1.22
CCDC50-203ENST00000460064 FAM90A27PA6NNH2 459 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 BUB1BO60566 1050 aaPredicted RBP7.39□□□□□ -1.23
CCDC50-203ENST00000460064 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 CYP17A1P05093 508 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 PTPN1P18031 435 aaKnown RBP7.39□□□□□ -1.23
CCDC50-203ENST00000460064 LSP1P33241 339 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 GRIN1Q05586 938 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 LRP8Q14114 963 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 NR1I3Q14994 352 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 RAB3GAP1Q15042 981 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 CC2D1AQ6P1N0 951 aaPredicted RBP7.39□□□□□ -1.23
CCDC50-203ENST00000460064 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 AHCYL2Q96HN2 611 aaKnown RBP7.39□□□□□ -1.23
CCDC50-203ENST00000460064 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 CHPF2Q9P2E5 772 aa7.39□□□□□ -1.23
CCDC50-203ENST00000460064 NOC2LQ9Y3T9 749 aaKnown RBP7.39□□□□□ -1.23
CCDC50-203ENST00000460064 TCRBV5S2A0A599 114 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 PTX3P26022 381 aaPredicted RBP7.38□□□□□ -1.23
CCDC50-203ENST00000460064 GJA4P35212 333 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 SMAD3P84022 425 aaKnown RBP7.38□□□□□ -1.23
CCDC50-203ENST00000460064 SEC23AQ15436 765 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 TERF2Q15554 542 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 SMAD2Q15796 467 aaKnown RBP7.38□□□□□ -1.23
CCDC50-203ENST00000460064 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 RASSF3Q86WH2 238 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 RAVER1Q8IY67 606 aaKnown RBP7.38□□□□□ -1.23
CCDC50-203ENST00000460064 ARRDC4Q8NCT1 418 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 YIPF4Q9BSR8 244 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 MENTQ9BUN1 341 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 EID1Q9Y6B2 187 aa7.38□□□□□ -1.23
CCDC50-203ENST00000460064 PRAMEF25A6NGN4 478 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 GABRDO14764 452 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 PDE6BP35913 854 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 EPHB1P54762 984 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 GP2P55259 537 aaKnown RBP7.37□□□□□ -1.23
CCDC50-203ENST00000460064 ERVFRD-1P60508 538 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 PRR5P85299 388 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 SLC9A5Q14940 896 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 FLAD1Q8NFF5 587 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 SPEF1Q9Y4P9 236 aa7.37□□□□□ -1.23
CCDC50-203ENST00000460064 FBXO21O94952 628 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 C4BPAP04003 597 aaKnown RBP7.36□□□□□ -1.23
CCDC50-203ENST00000460064 NEK2P51955 445 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 PHC1P78364 1004 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 RGL3Q3MIN7 710 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 RPTNQ6XPR3 784 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 ZZZ3Q8IYH5 903 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 ZNF610Q8N9Z0 462 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 INTS4Q96HW7 963 aaKnown RBP7.36□□□□□ -1.23
CCDC50-203ENST00000460064 AASDHPPTQ9NRN7 309 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 C14orf119Q9NWQ9 140 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 HCFC2Q9Y5Z7 792 aa7.36□□□□□ -1.23
CCDC50-203ENST00000460064 TNKSO95271 1327 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 SCO2A0A1W2PP80 73 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
CCDC50-203ENST00000460064 ACOT7O00154 380 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms