RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
TIMP1-205ENST00000456754 C16orf70Q9BSU1 422 aa15.9■□□□□ 0.14
TIMP1-205ENST00000456754 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
TIMP1-205ENST00000456754 LGALS2P05162 132 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 HOXD8P13378 290 aaPredicted RBP15.89■□□□□ 0.13
TIMP1-205ENST00000456754 TCF7P36402 384 aaPredicted RBP15.89■□□□□ 0.13
TIMP1-205ENST00000456754 TXKP42681 527 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 TRAPPC10P48553 1259 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 SPIRE1Q08AE8 756 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 PTGDRQ13258 359 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 RILPL1Q5EBL4 403 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 B3GNT9Q6UX72 402 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 USP28Q96RU2 1077 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 C11orf49Q9H6J7 331 aa15.89■□□□□ 0.13
TIMP1-205ENST00000456754 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 MARK3P27448 753 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 HIC1Q14526 733 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 UGCGQ16739 394 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 DGKDQ16760 1214 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 ABHD15Q6UXT9 468 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 CCDC60Q8IWA6 550 aaPredicted RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 ANKLE1Q8NAG6 615 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 PCSK9Q8NBP7 692 aaKnown RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 GIMAP8Q8ND71 665 aaPredicted RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 RIT2Q99578 217 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 NAP1L4Q99733 375 aaKnown RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 TFIP11Q9UBB9 837 aaKnown RBP15.88■□□□□ 0.13
TIMP1-205ENST00000456754 ELP1O95163 1332 aa15.88■□□□□ 0.13
TIMP1-205ENST00000456754 TRIP12Q14669 1992 aaPredicted RBP15.87■□□□□ 0.13
TIMP1-205ENST00000456754 POTEMA6NI47 508 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 MARCH6O60337 910 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 ATG7O95352 703 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 SUPT20HL2P0C7V6 817 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 GRIN1Q05586 938 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 LRRC26Q2I0M4 334 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 SEPT1Q8WYJ6 367 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 VTI1AQ96AJ9 217 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 FAM20AQ96MK3 541 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 MTG1Q9BT17 334 aaPredicted RBP15.87■□□□□ 0.13
TIMP1-205ENST00000456754 TTC12Q9H892 705 aaPredicted RBP15.87■□□□□ 0.13
TIMP1-205ENST00000456754 TCHHQ07283 1943 aa15.87■□□□□ 0.13
TIMP1-205ENST00000456754 MYH9P35579 1960 aaKnown RBP15.87■□□□□ 0.13
TIMP1-205ENST00000456754 MOXD2PA6NHM9 499 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 TBX3O15119 743 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 PPFIA4O75335 1185 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 ATP4AP20648 1035 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 TECP42680 631 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 PSEN2P49810 448 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 ATP2C1P98194 919 aaPredicted RBP15.86■□□□□ 0.13
TIMP1-205ENST00000456754 KRT76Q01546 638 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 PPP2R5CQ13362 524 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 PTPAQ15257 358 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 ZNF746Q6NUN9 644 aaPredicted RBP15.86■□□□□ 0.13
TIMP1-205ENST00000456754 SWSAP1Q6NVH7 229 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
TIMP1-205ENST00000456754 MIER3Q7Z3K6 550 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 NECAB2Q7Z6G3 386 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 ZBTB10Q96DT7 871 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 RNPEPQ9H4A4 650 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
TIMP1-205ENST00000456754 STARD7Q9NQZ5 370 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 DISC1Q9NRI5 854 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 POLR3EQ9NVU0 708 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
TIMP1-205ENST00000456754 SAMM50Q9Y512 469 aa15.86■□□□□ 0.13
TIMP1-205ENST00000456754 A0A087WWV3 80 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 IGKV6D-21A0A0A0MT36 114 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 TMEM150BA6NC51 233 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 PP2D1A8MPX8 630 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 ZEB2O60315 1214 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 LGR5O75473 907 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 F2P00734 622 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
TIMP1-205ENST00000456754 ZNF200P98182 395 aaPredicted RBP15.85■□□□□ 0.13
TIMP1-205ENST00000456754 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
TIMP1-205ENST00000456754 MFSD10Q14728 455 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 KIAA0753Q2KHM9 967 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 TRIM60Q495X7 471 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 BANK1Q8NDB2 785 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 GLT1D1Q96MS3 346 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 RGL1Q9NZL6 768 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 GABBR1Q9UBS5 961 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 PCDHA12Q9UN75 941 aa15.85■□□□□ 0.13
TIMP1-205ENST00000456754 DNAH12Q6ZR08 3092 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 WDR64B1ANS9 1081 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 H3BRB1 525 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 HAS3O00219 553 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 BACH1O14867 736 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 ZNF862O60290 1169 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
TIMP1-205ENST00000456754 CDC25AP30304 524 aa15.84■□□□□ 0.13
TIMP1-205ENST00000456754 ORC2Q13416 577 aaPredicted RBP15.84■□□□□ 0.13
TIMP1-205ENST00000456754 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms