RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 RIT2Q99578 217 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 NR2E3Q9Y5X4 410 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 H3BRB1 525 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 LGR5O75473 907 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 PSMD10O75832 226 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 CD4P01730 458 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 FAAP100Q0VG06 881 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 KIAA0753Q2KHM9 967 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 ABHD15Q6UXT9 468 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 TUT1Q9H6E5 874 aaKnown RBP16.64■□□□□ 0.25
CLCN1-203ENST00000455478 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 MROH7Q68CQ1 1323 aa16.64■□□□□ 0.25
CLCN1-203ENST00000455478 IGKV6D-21A0A0A0MT36 114 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 DCDC2CA8MYV0 355 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 H0YGN5 161 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 H3BQV1 296 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 PTPN11Q06124 597 aaPredicted RBP16.63■□□□□ 0.25
CLCN1-203ENST00000455478 GNL2Q13823 731 aaKnown RBP16.63■□□□□ 0.25
CLCN1-203ENST00000455478 LRCH2Q5VUJ6 765 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 ZNF746Q6NUN9 644 aaPredicted RBP16.63■□□□□ 0.25
CLCN1-203ENST00000455478 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 HAS1Q92839 578 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 KATNAL1Q9BW62 490 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 TRPV6Q9H1D0 765 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 PDLIM7Q9NR12 457 aa16.63■□□□□ 0.25
CLCN1-203ENST00000455478 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 TBX3O15119 743 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 GAS7O60861 476 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 SYN1P17600 705 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
CLCN1-203ENST00000455478 KRT76Q01546 638 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 B3GNT9Q6UX72 402 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
CLCN1-203ENST00000455478 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 SMARCAD1Q9H4L7 1026 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 HDAC6Q9UBN7 1215 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 ZMYND8Q9ULU4 1186 aaPredicted RBP16.62■□□□□ 0.25
CLCN1-203ENST00000455478 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
CLCN1-203ENST00000455478 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-203ENST00000455478 B4GALT4O60513 344 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 CLTBP09497 229 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 PDCP20941 246 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 SYT1P21579 422 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 HIC1Q14526 733 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-203ENST00000455478 SMAP1Q8IYB5 467 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-203ENST00000455478 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 UNC45AQ9H3U1 944 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 TRMT13Q9NUP7 481 aaKnown RBP16.61■□□□□ 0.25
CLCN1-203ENST00000455478 TBX21Q9UL17 535 aa16.61■□□□□ 0.25
CLCN1-203ENST00000455478 WDR81Q562E7 1941 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 KIAA0355O15063 1070 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
CLCN1-203ENST00000455478 TRAPPC10P48553 1259 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 STAT5BP51692 787 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 ZNF174Q15697 407 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 SWSAP1Q6NVH7 229 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 CCDC60Q8IWA6 550 aaPredicted RBP16.6■□□□□ 0.25
CLCN1-203ENST00000455478 GLG1Q92896 1179 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 MTMR9Q96QG7 549 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 CTAGE1Q96RT6 745 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 ERAP1Q9NZ08 941 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 VAV3Q9UKW4 847 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
CLCN1-203ENST00000455478 PCDHA10Q9Y5I2 948 aa16.6■□□□□ 0.25
CLCN1-203ENST00000455478 MYH9P35579 1960 aaKnown RBP16.59■□□□□ 0.25
CLCN1-203ENST00000455478 KAT6AQ92794 2004 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 WDR64B1ANS9 1081 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 NEMFO60524 1076 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 SMIM10L2AP0DMW4 78 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 SMIM10L2BP0DMW5 78 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 ITGB8P26012 769 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 HOXC8P31273 242 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 MCM7P33993 719 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
CLCN1-203ENST00000455478 NBR1Q14596 966 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 AFAP1L1Q8TED9 768 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 AZI2Q9H6S1 392 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
CLCN1-203ENST00000455478 DISC1Q9NRI5 854 aa16.59■□□□□ 0.25
CLCN1-203ENST00000455478 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
CLCN1-203ENST00000455478 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms