RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 EPHX3Q9H6B9 360 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 RIOX1Q9H6W3 641 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 RWDD3Q9Y3V2 267 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 NLRC5Q86WI3 1866 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 FRMPD4Q14CM0 1322 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 IFIT3O14879 490 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 PPP1R11O60927 126 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 KCNA5P22460 613 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 ZNF200P98182 395 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 MBTPS1Q14703 1052 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 WTAPQ15007 396 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 ASTLQ6HA08 431 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 TAF2Q6P1X5 1199 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 NLRX1Q86UT6 975 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 WNT8BQ93098 351 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 TOP1MTQ969P6 601 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 CDHR1Q96JP9 859 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 INPP4AQ96PE3 977 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 SENP7Q9BQF6 1050 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 LZTS2Q9BRK4 669 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 RAPGEFL1Q9UHV5 662 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 NRCAMQ92823 1304 aa9.26□□□□□ -0.93
NIF3L1-209ENST00000454952 SPATA31C2B4DYI2 1134 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 H3BNC9 293 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 TREHO43280 583 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 ATMINO43313 823 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 RB1P06400 928 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SMARCA1P28370 1054 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 KIF5BP33176 963 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 GNAQP50148 359 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SP2Q02086 613 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 GPM6BQ13491 265 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 EPC2Q52LR7 807 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 PCNX4Q63HM2 1172 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SPRED2Q7Z698 418 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 GJD3Q8N144 294 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 NCOA7Q8NI08 942 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 IL31RAQ8NI17 732 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 CTCFLQ8NI51 663 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SMARCC2Q8TAQ2 1214 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 RRP36Q96EU6 259 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 PIGSQ96S52 555 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 MAP3K14Q99558 947 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 GPR20Q99678 358 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 C17orf80Q9BSJ5 609 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 LMAN2LQ9H0V9 348 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 RNPEPQ9H4A4 650 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 NSUN3Q9H649 340 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SCUBE2Q9NQ36 999 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 SEC63Q9UGP8 760 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-209ENST00000454952 DOCK5Q9H7D0 1870 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 PRR33A8MZF0 331 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 SORBS3O60504 671 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 DDAH1O94760 285 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 ARHGAP4P98171 946 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 TROAPQ12815 778 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 TCTN1Q2MV58 587 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 CYB5R4Q7L1T6 521 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 CYFIP1Q7L576 1253 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 RPAINQ86UA6 219 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 TMEM192Q8IY95 271 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 TMTC2Q8N394 836 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 FIBCD1Q8N539 461 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 PDCD7Q8N8D1 485 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 NEK9Q8TD19 979 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 PABPC5Q96DU9 382 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 IL17RAQ96F46 866 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 MTA3Q9BTC8 594 aa9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 C11orf84Q9BUA3 381 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 UPF3BQ9BZI7 483 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-209ENST00000454952 C5orf67F2Z3F1 127 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 UPP2O95045 317 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 IGHDP01880 384 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 CTSHP09668 335 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 MRPS9P82933 396 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 HIC1Q14526 733 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 LMBR1Q8WVP7 490 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 PPP2R3CQ969Q6 453 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 POP1Q99575 1024 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 SPZ1Q9BXG8 430 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 EHMT1Q9H9B1 1298 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms