RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZNF577Q9BSK1 485 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 STK24Q9Y6E0 443 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CA12O43570 354 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 ITGB5P18084 799 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 PDE4DQ08499 809 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 SLC5A5Q92911 643 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 GPRASP2Q96D09 838 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CCSER1Q9C0I3 900 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 TCEAL9Q9UHQ7 104 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 HOOK1Q9UJC3 728 aaKnown RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNX17-204ENST00000453453 DNAJC25-GNG10A0A024R161 153 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 POLR2DO15514 142 aaKnown RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 MAFGO15525 162 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 GAS7O60861 476 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 AOC2O75106 756 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 PGK2P07205 417 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 NLRP12P59046 1061 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CRHR2Q13324 411 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 ARID5BQ14865 1188 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 LRCH2Q5VUJ6 765 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 E4F1Q66K89 784 aaPredicted RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 C17orf99Q6UX52 265 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 USP49Q70CQ1 688 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CABP7Q86V35 215 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 CALML4Q96GE6 196 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
SNX17-204ENST00000453453 ZIC5Q96T25 663 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 KCNH7Q9NS40 1196 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 KIAA1468Q9P260 1216 aa17.69■□□□□ 0.42
SNX17-204ENST00000453453 KIAA1217Q5T5P2 1943 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 SOWAHBA6NEL2 793 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 IPO5O00410 1097 aaKnown RBP17.68■□□□□ 0.42
SNX17-204ENST00000453453 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
SNX17-204ENST00000453453 ARP10275 920 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 PDILTQ8N807 584 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 IQUBQ8NA54 791 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 CDK5RAP3Q96JB5 506 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 RIT2Q99578 217 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 TEKT3Q9BXF9 490 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 R3HDMLQ9H3Y0 253 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 SLC5A4Q9NY91 659 aa17.68■□□□□ 0.42
SNX17-204ENST00000453453 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 POTEMA6NI47 508 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 SLC15A5A6NIM6 579 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 ASB14A6NK59 587 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 SLC26A4O43511 780 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 ADORA2AP29274 412 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 CYP2C19P33261 490 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 ETF1P62495 437 aaKnown RBP17.67■□□□□ 0.42
SNX17-204ENST00000453453 CNNM3Q8NE01 707 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 GJA10Q969M2 543 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
SNX17-204ENST00000453453 UIMC1Q96RL1 719 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 AGO4Q9HCK5 861 aaKnown RBP17.67■□□□□ 0.42
SNX17-204ENST00000453453 TBC1D22BQ9NU19 505 aa17.67■□□□□ 0.42
SNX17-204ENST00000453453 GOLGA6L9A6NEM1 432 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 PP2D1A8MPX8 630 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 EDNRBP24530 442 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 STAT6P42226 847 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 TEX35Q5T0J7 233 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 RRAGBQ5VZM2 374 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 NCAPH2Q6IBW4 605 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 KRBA2Q6ZNG9 492 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 DPP9Q86TI2 863 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 DHX58Q96C10 678 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 ZNF446Q9NWS9 450 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 KDM3AQ9Y4C1 1321 aa17.66■□□□□ 0.42
SNX17-204ENST00000453453 PSMD10O75832 226 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 ZRANB2O95218 330 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX17-204ENST00000453453 CDC25AP30304 524 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 MAP2K2P36507 400 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 GRB14Q14449 540 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
SNX17-204ENST00000453453 DISC1Q9NRI5 854 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 TRMT1Q9NXH9 659 aaKnown RBP17.65■□□□□ 0.42
SNX17-204ENST00000453453 PPP2R5CQ13362 524 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 LONRF3Q496Y0 759 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 NT5C3AQ9H0P0 336 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 CUEDC2Q9H467 287 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 PKD2L1Q9P0L9 805 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 SERTAD1Q9UHV2 236 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 VAV3Q9UKW4 847 aa17.65■□□□□ 0.42
SNX17-204ENST00000453453 FHOD1Q9Y613 1164 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms