RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 ANLNQ9NQW6 1124 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 PCDHB4Q9Y5E5 795 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 CCDC195A0A1B0GUA6 201 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 PABPN1LA6NDY0 278 aaKnown RBP8.41□□□□□ -1.06
RIF1-206ENST00000453091 LRRIQ4A6NIV6 560 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 MAGEA9P43362 315 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 ZNF394Q53GI3 561 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 ALKBH5Q6P6C2 394 aaKnown RBP8.41□□□□□ -1.06
RIF1-206ENST00000453091 NLRP14Q86W24 1093 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 DNAAF5Q86Y56 855 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 PASD1Q8IV76 773 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 CEP120Q8N960 986 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 FAM118BQ9BPY3 351 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 TDRD3Q9H7E2 651 aaKnown RBP8.41□□□□□ -1.06
RIF1-206ENST00000453091 ZWILCHQ9H900 591 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 RASGRF2O14827 1237 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 SPAG7O75391 227 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 IL6STP40189 918 aaPredicted RBP8.41□□□□□ -1.06
RIF1-206ENST00000453091 SH2D4BQ5SQS7 431 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 TMTC3Q6ZXV5 915 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 TRIM51Q9BSJ1 452 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 TEKT3Q9BXF9 490 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
RIF1-206ENST00000453091 FBXO2Q9UK22 296 aaPredicted RBP8.41□□□□□ -1.06
RIF1-206ENST00000453091 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 SERPING1P05155 500 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 MMEP08473 750 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 MARK3P27448 753 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 NSFP46459 744 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 ANTXR2P58335 489 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 TXNRD1Q16881 649 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 BBS9Q3SYG4 887 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 ICE2Q659A1 982 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 RNF207Q6ZRF8 634 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 NOA1Q8NC60 698 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 ZMYND12Q9H0C1 365 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 VCX3BQ9H321 246 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 C1orf112Q9NSG2 853 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 AGPAT5Q9NUQ2 364 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 TTC7AQ9ULT0 858 aaPredicted RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 SSX2IPQ9Y2D8 614 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 SLC4A7Q9Y6M7 1214 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 ABL1P00519 1130 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 PLS3P13797 630 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 MSH2P43246 934 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 TRAF1Q13077 416 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 SEPT12Q8IYM1 358 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 LGALS16A8MUM7 142 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 MYO1FO00160 1098 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 ZNF609O15014 1411 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 TDP2O95551 362 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 RFC1P35251 1148 aaPredicted RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 CDK8P49336 464 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 FOXO4P98177 505 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 ENAHQ8N8S7 591 aaPredicted RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 RAB3IPQ96QF0 476 aaPredicted RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 MPHOSPH6Q99547 160 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 BHMT2Q9H2M3 363 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 SUN1O94901 812 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 KITP10721 976 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 BASP1P80723 227 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 MCUQ8NE86 351 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 SLC8A1P32418 973 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 PSMC2P35998 433 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 DDX23Q9BUQ8 820 aaKnown RBP8.4□□□□□ -1.06
RIF1-206ENST00000453091 DNAJC12Q9UKB3 198 aa8.4□□□□□ -1.06
RIF1-206ENST00000453091 USP17L10C9JJH3 530 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 DDX42Q86XP3 938 aaKnown RBP eCLIP8.4□□□□□ -1.07
RIF1-206ENST00000453091 POMGNT1Q8WZA1 660 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 TRIM4Q9C037 500 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 NOD1Q9Y239 953 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.4□□□□□ -1.07
RIF1-206ENST00000453091 POTEB3A0JP26 581 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 POTECB2RU33 542 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 ALDH1B1P30837 517 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 YARSP54577 528 aaKnown RBP8.4□□□□□ -1.07
RIF1-206ENST00000453091 ANKRD40Q6AI12 368 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 POTEBQ6S5H4 581 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 ATG9AQ7Z3C6 839 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 NLRX1Q86UT6 975 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 NME8Q8N427 588 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.07
RIF1-206ENST00000453091 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 PNKPQ96T60 521 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 ZNF577Q9BSK1 485 aa8.4□□□□□ -1.07
RIF1-206ENST00000453091 ACTN1P12814 892 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 SH2D4AQ9H788 454 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms