RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 RAPGEF6Q8TEU7 1601 aa6.94□□□□□ -1.3
SEMA3A-205ENST00000448879 HFM1A2PYH4 1435 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 AKNAQ7Z591 1439 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 CDK13Q14004 1512 aaKnown RBP6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 NPEPPSL1A6NEC2 478 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 B4GALT3O60512 393 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 TADA3O75528 432 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 TNFRSF1AP19438 455 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 PHOSPHO1Q8TCT1 267 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 MICAL1Q8TDZ2 1067 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 DVL3Q92997 716 aaPredicted RBP6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 SMOC1Q9H4F8 434 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 CEP170Q5SW79 1584 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
SEMA3A-205ENST00000448879 GRIN2AQ12879 1464 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 MATN3O15232 486 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 GJB6O95452 261 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 MLLT6P55198 1093 aaPredicted RBP6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 USP53Q70EK8 1073 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 EPN3Q9H201 632 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 ZDHHC9Q9Y397 364 aa6.92□□□□□ -1.3
SEMA3A-205ENST00000448879 KIAA0586Q9BVV6 1533 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 KDM6BO15054 1643 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 ADGBQ8N7X0 1667 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 LRG1P02750 347 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 PPP2R2AP63151 447 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 SLC10A6Q3KNW5 377 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 TRIM48Q8IWZ4 208 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 C1QTNF3Q9BXJ4 246 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 KRTAP3-1Q9BYR8 98 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 BARX1Q9HBU1 254 aaPredicted RBP6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 NAIPQ13075 1403 aa6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 DENND4BO75064 1496 aaPredicted RBP6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 MAGI1Q96QZ7 1491 aaPredicted RBP6.91□□□□□ -1.3
SEMA3A-205ENST00000448879 ITSN2Q9NZM3 1697 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 MAP4K2Q12851 820 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 VASNQ6EMK4 673 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 CIR1Q86X95 450 aaPredicted RBP6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 PIP4K2CQ8TBX8 421 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 ZCCHC14Q8WYQ9 949 aaKnown RBP6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 C1orf159Q96HA4 380 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 SRRDQ9UH36 339 aa6.9□□□□□ -1.3
SEMA3A-205ENST00000448879 NUP153P49790 1475 aaKnown RBP6.9□□□□□ -1.31
SEMA3A-205ENST00000448879 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 SLC27A2O14975 620 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 FSHBP01225 129 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 GRIA2P42262 883 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 ARID5AQ03989 594 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 GRIN1Q05586 938 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 CYP4F22Q6NT55 531 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 KLHL36Q8N4N3 616 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 SH3RF3Q8TEJ3 882 aaPredicted RBP6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 PHF20Q9BVI0 1012 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 SSBP3Q9BWW4 388 aaPredicted RBP6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 DEF6Q9H4E7 631 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 RBPJLQ9UBG7 517 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 NPFFR2Q9Y5X5 522 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 MTUS2Q5JR59 1369 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 UACAQ9BZF9 1416 aa6.89□□□□□ -1.31
SEMA3A-205ENST00000448879 POLR1AO95602 1720 aaPredicted RBP6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 NUP160Q12769 1436 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 MIA2Q96PC5 1412 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 A0A1W2PQU0 124 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 B4GALT4O60513 344 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 PPP2CBP62714 309 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 PPP2CAP67775 309 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 HNRNPLLQ8WVV9 542 aaKnown RBP6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 CDK5RAP1Q96SZ6 601 aaKnown RBP6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 SLC6A20Q9NP91 592 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
SEMA3A-205ENST00000448879 CDC42BPAQ5VT25 1732 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 SYNJ2O15056 1496 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 MSCO60682 206 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 FBXO21O94952 628 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 DNAJA1P31689 397 aaKnown RBP6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 NFATC3Q12968 1075 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 ICAM4Q14773 271 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 PHF19Q5T6S3 580 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 ZNF585AQ6P3V2 769 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 MBD6Q96DN6 1003 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 KIF14Q15058 1648 aa6.87□□□□□ -1.31
SEMA3A-205ENST00000448879 FGRP09769 529 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms