RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 OVOS1Q6IE37 1185 aa8.63□□□□□ -1.03
LINC00349-201ENST00000448748 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
LINC00349-201ENST00000448748 ATG4DQ86TL0 474 aaPredicted RBP8.63□□□□□ -1.03
LINC00349-201ENST00000448748 REXO1Q8N1G1 1221 aaKnown RBP8.63□□□□□ -1.03
LINC00349-201ENST00000448748 RGS22Q8NE09 1264 aa8.63□□□□□ -1.03
LINC00349-201ENST00000448748 MRRFQ96E11 262 aaKnown RBP8.63□□□□□ -1.03
LINC00349-201ENST00000448748 DUSP15Q9H1R2 295 aaPredicted RBP8.63□□□□□ -1.03
LINC00349-201ENST00000448748 NMRK2Q9NPI5 230 aa8.63□□□□□ -1.03
LINC00349-201ENST00000448748 ZNF541Q9H0D2 1346 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 GRM8O00222 908 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 SCAMP3O14828 347 aaKnown RBP8.62□□□□□ -1.03
LINC00349-201ENST00000448748 RGS13O14921 159 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 RAG1P15918 1043 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 GBP1P32455 592 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 RARSP54136 660 aaKnown RBP8.62□□□□□ -1.03
LINC00349-201ENST00000448748 C1QTNF8P60827 252 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 RPS8P62241 208 aaKnown RBP8.62□□□□□ -1.03
LINC00349-201ENST00000448748 RACK1P63244 317 aaKnown RBP8.62□□□□□ -1.03
LINC00349-201ENST00000448748 FOXO4P98177 505 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 KAZALD1Q96I82 304 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 ANTXR1Q9H6X2 564 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 GREM2Q9H772 168 aa8.62□□□□□ -1.03
LINC00349-201ENST00000448748 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 UBOX5O94941 541 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
LINC00349-201ENST00000448748 ZNF165P49910 485 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 ASPNQ9BXN1 380 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 KIAA1522Q9P206 1035 aaPredicted RBP8.61□□□□□ -1.03
LINC00349-201ENST00000448748 DDX41Q9UJV9 622 aaKnown RBP8.61□□□□□ -1.03
LINC00349-201ENST00000448748 KCNH3Q9ULD8 1083 aa8.61□□□□□ -1.03
LINC00349-201ENST00000448748 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 IRS2Q9Y4H2 1338 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 BIN1O00499 593 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 TOMM70O94826 608 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 ESR1P03372 595 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 SRFP11831 508 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
LINC00349-201ENST00000448748 RABL6Q3YEC7 729 aaPredicted RBP8.6□□□□□ -1.03
LINC00349-201ENST00000448748 EPHA10Q5JZY3 1008 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 CDCP2Q5VXM1 449 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 DPP8Q6V1X1 898 aaPredicted RBP8.6□□□□□ -1.03
LINC00349-201ENST00000448748 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 GPC2Q8N158 579 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 SUPT20HQ8NEM7 779 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
LINC00349-201ENST00000448748 ARHGAP45Q92619 1136 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 GPR62Q9BZJ7 368 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 TRIT1Q9H3H1 467 aaKnown RBP8.6□□□□□ -1.03
LINC00349-201ENST00000448748 CNNM2Q9H8M5 875 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 SMC4Q9NTJ3 1288 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 POLLQ9UGP5 575 aa8.6□□□□□ -1.03
LINC00349-201ENST00000448748 KIF16BQ96L93 1317 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 NBPF7P0C2Y1 421 aaPredicted RBP8.59□□□□□ -1.03
LINC00349-201ENST00000448748 GPSM2P81274 684 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 GAB4Q2WGN9 574 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 NLRC3Q7RTR2 1065 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 METTL16Q86W50 562 aaKnown RBP8.59□□□□□ -1.03
LINC00349-201ENST00000448748 TBC1D16Q8TBP0 767 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 CDC5LQ99459 802 aaKnown RBP8.59□□□□□ -1.03
LINC00349-201ENST00000448748 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 USP44Q9H0E7 712 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 CTNND2Q9UQB3 1225 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 MED23Q9ULK4 1368 aa8.59□□□□□ -1.03
LINC00349-201ENST00000448748 XDHP47989 1333 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 YDJCA8MPS7 323 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 PPIP5K2O43314 1243 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
LINC00349-201ENST00000448748 VEGFAP15692 232 aaPredicted RBP8.58□□□□□ -1.04
LINC00349-201ENST00000448748 CREG2Q8IUH2 290 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 ANKRD18AQ8IVF6 992 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 TMEM40Q8WWA1 233 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 C19orf73Q9NVV2 129 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 GPATCH2Q9NW75 528 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 MINPP1Q9UNW1 487 aa8.58□□□□□ -1.04
LINC00349-201ENST00000448748 SHISA3A0PJX4 238 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 CHMP4BP1P59074 171 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 FSTL1Q12841 308 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
LINC00349-201ENST00000448748 TSPYL5Q86VY4 417 aaPredicted RBP8.57□□□□□ -1.04
LINC00349-201ENST00000448748 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC00349-201ENST00000448748 SLAMF8Q9P0V8 285 aa8.57□□□□□ -1.04
LINC00349-201ENST00000448748 TRPM7Q96QT4 1865 aa8.56□□□□□ -1.04
LINC00349-201ENST00000448748 IQCA1LA6NCM1 817 aa8.56□□□□□ -1.04
LINC00349-201ENST00000448748 MEIS3P2A8K0S8 358 aa8.56□□□□□ -1.04
LINC00349-201ENST00000448748 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
LINC00349-201ENST00000448748 TRIM27P14373 513 aa8.56□□□□□ -1.04
LINC00349-201ENST00000448748 NME1P15531 152 aaKnown RBP8.56□□□□□ -1.04
LINC00349-201ENST00000448748 CCT4P50991 539 aaKnown RBP8.56□□□□□ -1.04
LINC00349-201ENST00000448748 HDLBPQ00341 1268 aaKnown RBP8.56□□□□□ -1.04
LINC00349-201ENST00000448748 CXCL9Q07325 125 aa8.56□□□□□ -1.04
LINC00349-201ENST00000448748 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
LINC00349-201ENST00000448748 SLC4A10Q6U841 1118 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms