RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 SPATS2Q86XZ4 545 aaKnown RBP17.32■□□□□ 0.36
CHRD-205ENST00000448472 CXorf56Q9H5V9 222 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 GRID2IPA4D2P6 1211 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 MEIS1O00470 390 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 RASA1P20936 1047 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 PTK2Q05397 1052 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
CHRD-205ENST00000448472 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 DISP2A7MBM2 1401 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 BCL9O00512 1426 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 CCDC172P0C7W6 258 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 LRRC55Q6ZSA7 311 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 PGRMC1O00264 195 aaKnown RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 FAM107AO95990 144 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 LDHCP07864 332 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 COPB2P35606 906 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 BTDP43251 543 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 IKQ13123 557 aaPredicted RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 SLC51AQ86UW1 340 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 TBC1D31Q96DN5 1066 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 GEMIN8Q9NWZ8 242 aaKnown RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 M0R2N6 131 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 PJA2O43164 708 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 ITGA4P13612 1032 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 GRIK5Q16478 980 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 RUBCNQ92622 972 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 YY1AP1Q9H869 796 aa17.31■□□□□ 0.36
CHRD-205ENST00000448472 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 UTP11Q9Y3A2 253 aaKnown RBP17.31■□□□□ 0.36
CHRD-205ENST00000448472 POTEB3A0JP26 581 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 TMEM110-MUSTN1A8MSY1 372 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 POTECB2RU33 542 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 TTI1O43156 1089 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 KIF4AO95239 1232 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 RPSAP08865 295 aaKnown RBP17.3■□□□□ 0.36
CHRD-205ENST00000448472 LLGL1Q15334 1064 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 POTEBQ6S5H4 581 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 CCDC26Q8TAB7 109 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 ARMCX3Q9UH62 379 aaPredicted RBP17.3■□□□□ 0.36
CHRD-205ENST00000448472 NOC2LQ9Y3T9 749 aaKnown RBP17.3■□□□□ 0.36
CHRD-205ENST00000448472 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 MSL1Q68DK7 614 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
CHRD-205ENST00000448472 CNPY4Q8N129 248 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 ALS2Q96Q42 1657 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 CLIC2O15247 247 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 KCNQ2O43526 872 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 IFNAR2P48551 515 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 GKAP1Q5VSY0 366 aaPredicted RBP17.3■□□□□ 0.36
CHRD-205ENST00000448472 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
CHRD-205ENST00000448472 FLOT1O75955 427 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 GSTO1P78417 241 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHRD-205ENST00000448472 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
CHRD-205ENST00000448472 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 CHUKO15111 745 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 CTNND1O60716 968 aaKnown RBP17.29■□□□□ 0.36
CHRD-205ENST00000448472 VIMP08670 466 aaKnown RBP17.29■□□□□ 0.36
CHRD-205ENST00000448472 H2AFZP0C0S5 128 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 STAT3P40763 770 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 H2AFVQ71UI9 128 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 COL18A1P39060 1754 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 GFPT2O94808 682 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 FLT3P36888 993 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 ITGB3BPQ13352 177 aaPredicted RBP17.29■□□□□ 0.36
CHRD-205ENST00000448472 PPP1R7Q15435 360 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 CCDC25Q86WR0 208 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 INPP4AQ96PE3 977 aaPredicted RBP17.29■□□□□ 0.36
CHRD-205ENST00000448472 TMBIM4Q9HC24 238 aa17.29■□□□□ 0.36
CHRD-205ENST00000448472 XRCC5P13010 732 aaKnown RBP17.28■□□□□ 0.36
CHRD-205ENST00000448472 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 GJB7Q6PEY0 223 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 PIK3R5Q8WYR1 880 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHRD-205ENST00000448472 NOL4O94818 638 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 FGGP02679 453 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 SLCO1A2P46721 670 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 PPP2R2AP63151 447 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms