RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 PLA2G6O60733 806 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 IPO7O95373 1038 aaKnown RBP18■□□□□ 0.47
OTUB1-204ENST00000447683 KCNMA1Q12791 1236 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 FAM83BQ5T0W9 1011 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 MTMR14Q8NCE2 650 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 BAP1Q92560 729 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 VPS33BQ9H267 617 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 RANBP17Q9H2T7 1088 aaKnown RBP18■□□□□ 0.47
OTUB1-204ENST00000447683 PUF60Q9UHX1 559 aaKnown RBP18■□□□□ 0.47
OTUB1-204ENST00000447683 MYO6Q9UM54 1294 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 LCA5LO95447 670 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
OTUB1-204ENST00000447683 CYP2W1Q8TAV3 490 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 CCDC42Q96M95 316 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 LACRTQ9GZZ8 138 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 TFR2Q9UP52 801 aa18■□□□□ 0.47
OTUB1-204ENST00000447683 ZNF263O14978 683 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 KRT18P05783 430 aaKnown RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 KCNA3P22001 575 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 VAV2P52735 878 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 CCDC40Q4G0X9 1142 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 TRAPPC11Q7Z392 1133 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 TRIM59Q8IWR1 403 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 CHURC1Q8WUH1 139 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 ZSWIM4Q9H7M6 989 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 RBBP6Q7Z6E9 1792 aaKnown RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 ZNF76P36508 570 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 PAPD7Q5XG87 772 aaKnown RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 CC2D1AQ6P1N0 951 aaPredicted RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 FAM83AQ86UY5 434 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 HOMEZQ8IX15 550 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 MSANTD4Q8NCY6 345 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 PDGFDQ9GZP0 370 aaPredicted RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 VCPKMTQ9H867 229 aa17.99■□□□□ 0.47
OTUB1-204ENST00000447683 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
OTUB1-204ENST00000447683 MEIS1O00470 390 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 PLEKP08567 350 aaPredicted RBP17.98■□□□□ 0.47
OTUB1-204ENST00000447683 RAD51AP2Q09MP3 1159 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 PDXDC1Q6P996 788 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 EPM2AIP1Q7L775 607 aaPredicted RBP17.98■□□□□ 0.47
OTUB1-204ENST00000447683 NEK11Q8NG66 645 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 LRRC53A6NM62 1247 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 EML1O00423 815 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 PSEN1P49768 467 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 AGBL3Q8NEM8 1001 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 TBC1D5Q92609 795 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 EIF2AK1Q9BQI3 630 aaKnown RBP17.98■□□□□ 0.47
OTUB1-204ENST00000447683 REEP2Q9BRK0 252 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 TSGA10Q9BZW7 698 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 TANGO6Q9C0B7 1094 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 ANKZF1Q9H8Y5 726 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 PGAP2Q9UHJ9 254 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 FAM184BQ9ULE4 1060 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 TRAF3IP3Q9Y228 551 aa17.98■□□□□ 0.47
OTUB1-204ENST00000447683 CTAGE15A4D2H0 777 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CCDC151A5D8V7 595 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 GCOM1H8Y6P7 765 aaPredicted RBP17.97■□□□□ 0.47
OTUB1-204ENST00000447683 EYA4O95677 639 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 TFRCP02786 760 aaKnown RBP17.97■□□□□ 0.47
OTUB1-204ENST00000447683 POLR2MP0CAP2 368 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CTAGE8P0CG41 777 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CYP27A1Q02318 531 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 SPA17Q15506 151 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 RRAGAQ7L523 313 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CTAGE6Q86UF2 777 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 FAM160B2Q86V87 743 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CTAGE4Q8IX94 777 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 WDR18Q9BV38 432 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CFBP00751 764 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 DPEP1P16444 411 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 ERCC3P19447 782 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CAP2P40123 477 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CASP5P51878 434 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 KIF11P52732 1056 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 MAP3K10Q02779 954 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 KIF5AQ12840 1032 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 BRD3Q15059 726 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CDAN1Q8IWY9 1227 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 SMCR8Q8TEV9 937 aaPredicted RBP17.97■□□□□ 0.47
OTUB1-204ENST00000447683 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
OTUB1-204ENST00000447683 VEZTQ9HBM0 779 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 CEP72Q9P209 647 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 RAB21Q9UL25 225 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 ZNRF3Q9ULT6 936 aa17.97■□□□□ 0.47
OTUB1-204ENST00000447683 MRPL11Q9Y3B7 192 aaKnown RBP17.97■□□□□ 0.47
OTUB1-204ENST00000447683 MYH10P35580 1976 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 PSMD10O75832 226 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 NOL4O94818 638 aa17.96■□□□□ 0.47
OTUB1-204ENST00000447683 SEC31AO94979 1220 aaKnown RBP17.96■□□□□ 0.47
OTUB1-204ENST00000447683 EIF4A3P38919 411 aaKnown RBP17.96■□□□□ 0.47
OTUB1-204ENST00000447683 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms