RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MOXD2PA6NHM9 499 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 DDX39AO00148 427 aaKnown RBP19.45■□□□□ 0.7
LIME1-202ENST00000444951 MSH4O15457 936 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 ARIH2O95376 493 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 C6orf222P0C671 652 aaPredicted RBP19.45■□□□□ 0.7
LIME1-202ENST00000444951 CST5P28325 142 aaPredicted RBP19.45■□□□□ 0.7
LIME1-202ENST00000444951 PTGDRQ13258 359 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 TTLL4Q14679 1199 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 ANKRD33Q7Z3H0 272 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 COPS5Q92905 334 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 CDHR1Q96JP9 859 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 TMEM39AQ9NV64 488 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 KIAA1217Q5T5P2 1943 aa19.45■□□□□ 0.7
LIME1-202ENST00000444951 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
LIME1-202ENST00000444951 DLL1O00548 723 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 ATP9AO75110 1047 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 BAG4O95429 457 aaKnown RBP19.44■□□□□ 0.7
LIME1-202ENST00000444951 ASGR1P07306 291 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 RAG1P15918 1043 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 TXKP42681 527 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 GJA9P57773 515 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 SP2Q02086 613 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 SP4Q02446 784 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 TNFAIP2Q03169 654 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 STK38Q15208 465 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
LIME1-202ENST00000444951 BCAS3Q9H6U6 928 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 DDX41Q9UJV9 622 aaKnown RBP19.44■□□□□ 0.7
LIME1-202ENST00000444951 CEP131Q9UPN4 1083 aa19.44■□□□□ 0.7
LIME1-202ENST00000444951 OR52Z1P0C646 297 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 SMPD1P17405 629 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 UBA1P22314 1058 aaKnown RBP19.43■□□□□ 0.7
LIME1-202ENST00000444951 ICAM3P32942 547 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 CDK7P50613 346 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 KRT85P78386 507 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 BEX3Q00994 111 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 IQSEC1Q6DN90 963 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 KCNV1Q6PIU1 500 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 ETNPPLQ8TBG4 499 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 TTYH1Q9H313 450 aaPredicted RBP19.43■□□□□ 0.7
LIME1-202ENST00000444951 TBX21Q9UL17 535 aa19.43■□□□□ 0.7
LIME1-202ENST00000444951 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
LIME1-202ENST00000444951 MAFGO15525 162 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 GAS7O60861 476 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 GGPS1O95749 300 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 MARCKSP29966 332 aaPredicted RBP19.42■□□□□ 0.7
LIME1-202ENST00000444951 ITGB3BPQ13352 177 aaPredicted RBP19.42■□□□□ 0.7
LIME1-202ENST00000444951 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
LIME1-202ENST00000444951 TPRNQ4KMQ1 711 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 LRCH2Q5VUJ6 765 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 CCDC62Q6P9F0 684 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 CYFIP1Q7L576 1253 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 HAS1Q92839 578 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 TOX2Q96NM4 488 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 SDF4Q9BRK5 362 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 KCNMB3Q9NPA1 279 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 POLR3EQ9NVU0 708 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 VCANP13611 3396 aa19.42■□□□□ 0.7
LIME1-202ENST00000444951 DCDC2CA8MYV0 355 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 CHMP2AO43633 222 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 TGFB3P10600 412 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 KCNA2P16389 499 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 FPGSQ05932 587 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 PTPAQ15257 358 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 GNASQ5JWF2 1037 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 DHX37Q8IY37 1157 aaKnown RBP19.41■□□□□ 0.7
LIME1-202ENST00000444951 SLC5A5Q92911 643 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 RNPC3Q96LT9 517 aaKnown RBP19.41■□□□□ 0.7
LIME1-202ENST00000444951 GLT1D1Q96MS3 346 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 GDPD2Q9HCC8 539 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 ELP1O95163 1332 aa19.41■□□□□ 0.7
LIME1-202ENST00000444951 DOCK5Q9H7D0 1870 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 DYNC1LI2O43237 492 aaPredicted RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 BMP15O95972 392 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 TECP42680 631 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 NASPP49321 788 aaPredicted RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 NKX3-2P78367 333 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 SMAD3P84022 425 aaKnown RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 NEDD9Q14511 834 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 DUSP28Q4G0W2 176 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 ATL3Q6DD88 541 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 OR6J1Q8NGC5 347 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 SPATA32Q96LK8 384 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 FAM20AQ96MK3 541 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 TEKT3Q9BXF9 490 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 TTC12Q9H892 705 aaPredicted RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 TCEAL9Q9UHQ7 104 aa19.4■□□□□ 0.7
LIME1-202ENST00000444951 GNEQ9Y223 722 aaKnown RBP19.4■□□□□ 0.7
LIME1-202ENST00000444951 VWA3AA6NCI4 1184 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 ARVCFO00192 962 aa19.39■□□□□ 0.69
LIME1-202ENST00000444951 TBX3O15119 743 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms