RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 KIF11P52732 1056 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RCN2Q14257 317 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RNF207Q6ZRF8 634 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 SMAP1Q8IYB5 467 aaPredicted RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 SKA2Q8WVK7 121 aaPredicted RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 STAG1Q8WVM7 1258 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 MASTLQ96GX5 879 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 HAUS4Q9H6D7 363 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 CDC23Q9UJX2 597 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 MAN2A1Q16706 1144 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 FAM160B1Q5W0V3 765 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 USP49Q70CQ1 688 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RASGRP2Q7LDG7 609 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RGL1Q9NZL6 768 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 STIM2Q9P246 746 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 TRIM10Q9UDY6 481 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 SWAP70Q9UH65 585 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 RIPOR2Q9Y4F9 1068 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 LRRC53A6NM62 1247 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 TLR3O15455 904 aaKnown RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 DHX40Q8IX18 779 aaKnown RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 RYBPQ8N488 228 aaPredicted RBP8.69□□□□□ -1.02
RIF1-205ENST00000444746 TRIML1Q8N9V2 468 aa8.69□□□□□ -1.02
RIF1-205ENST00000444746 CASP2P42575 452 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 CLCN6P51797 869 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 PTK2Q05397 1052 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 GRIN1Q05586 938 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 SWSAP1Q6NVH7 229 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 RPUSD2Q8IZ73 545 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 RWDD2AQ9UIY3 292 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 PALM3A6NDB9 673 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 CCNE1P24864 410 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 KLK7P49862 253 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 HADHQ16836 314 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 GPATCH4Q5T3I0 446 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 EXT2Q93063 718 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 ELMO3Q96BJ8 720 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 ABT1Q9ULW3 272 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 PALMO75781 387 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 NDUFA10O95299 355 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 NPR1P16066 1061 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 ATP11AP98196 1134 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 SLC7A3Q8WY07 619 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 FAM118BQ9BPY3 351 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 MSTO1Q9BUK6 570 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 DNAJC12Q9UKB3 198 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 NFU1Q9UMS0 254 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 ERFP50548 548 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 SNRNP48Q6IEG0 339 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 PRDM5Q9NQX1 630 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 ATP5DP30049 168 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 E2F5Q15329 346 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 QRICH1Q2TAL8 776 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 SGO2Q562F6 1265 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 ISCA1Q9BUE6 129 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 KIF9Q9HAQ2 790 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 INTUQ9ULD6 942 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 RNF40O75150 1001 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 NMT1P30419 496 aaKnown RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 IL1RL1Q01638 556 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 PFKFB3Q16875 520 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 TAOK1Q7L7X3 1001 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 MYLK4Q86YV6 388 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 TTC30BQ8N4P2 665 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 CCDC17Q96LX7 622 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 LBHD1Q9BQE6 289 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 NARFQ9UHQ1 456 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 TTC7AQ9ULT0 858 aaPredicted RBP8.68□□□□□ -1.02
RIF1-205ENST00000444746 ABCC12Q96J65 1359 aa8.68□□□□□ -1.02
RIF1-205ENST00000444746 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 MYO1FO00160 1098 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 ALDH3A1P30838 453 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 FBXO38Q6PIJ6 1188 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RAB17Q9H0T7 212 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 SNX24Q9Y343 169 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 A2ML1A8K2U0 1454 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 MAP3K4Q9Y6R4 1608 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 ZNF185O15231 689 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 MTM1Q13496 603 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 SLC30A10Q6XR72 485 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 ANKRD36BP1Q96IX9 119 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 COA1Q9GZY4 146 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 CLTAP09496 248 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 CLNS1AP54105 237 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms