RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 BCAS3Q9H6U6 928 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 MICAL3Q7RTP6 2002 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
MRPL40-202ENST00000443660 NRCAMQ92823 1304 aa17.21■□□□□ 0.34
MRPL40-202ENST00000443660 STAM2O75886 525 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 EYA4O95677 639 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 CHRNA1P02708 482 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 GHRP10912 638 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 ZXDAP98168 799 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 IFIT1BQ5T764 474 aaKnown RBP17.2■□□□□ 0.34
MRPL40-202ENST00000443660 UTP14CQ5TAP6 766 aaKnown RBP17.2■□□□□ 0.34
MRPL40-202ENST00000443660 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 STAG2Q8N3U4 1231 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 GPR20Q99678 358 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 KRT23Q9C075 422 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 IRF2BPLQ9H1B7 796 aa17.2■□□□□ 0.34
MRPL40-202ENST00000443660 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
MRPL40-202ENST00000443660 LINC00271P0C7V0 271 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 ICAM3P32942 547 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 ADAM17P78536 824 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 FBXL6Q8N531 539 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 LMBR1Q8WVP7 490 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 P2RX5Q93086 422 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
MRPL40-202ENST00000443660 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 MSLNLQ96KJ4 702 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 EHMT1Q9H9B1 1298 aa17.19■□□□□ 0.34
MRPL40-202ENST00000443660 WDFY4Q6ZS81 3184 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 FIBPO43427 364 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 DGKIO75912 1065 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 LPIN1Q14693 890 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
MRPL40-202ENST00000443660 HOMER1Q86YM7 354 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 EFHBQ8N7U6 833 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
MRPL40-202ENST00000443660 LOC730098B7Z3J9 87 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 SDSP20132 328 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
MRPL40-202ENST00000443660 COASYQ13057 564 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 CAMK1Q14012 370 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 SPPL3Q8TCT6 385 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 INPP4AQ96PE3 977 aaPredicted RBP17.17■□□□□ 0.34
MRPL40-202ENST00000443660 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
MRPL40-202ENST00000443660 CLEC1BQ9P126 229 aa17.17■□□□□ 0.34
MRPL40-202ENST00000443660 GFRA3O60609 400 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 NRIP1P48552 1158 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 MRPS9P82933 396 aaKnown RBP17.16■□□□□ 0.34
MRPL40-202ENST00000443660 SP4Q02446 784 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 TCF15Q12870 199 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 RBM23Q86U06 439 aaKnown RBP17.16■□□□□ 0.34
MRPL40-202ENST00000443660 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
MRPL40-202ENST00000443660 SMRP1Q8NCR6 262 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
MRPL40-202ENST00000443660 PIGSQ96S52 555 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 SENP7Q9BQF6 1050 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 MAD2L2Q9UI95 211 aa17.16■□□□□ 0.34
MRPL40-202ENST00000443660 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
MRPL40-202ENST00000443660 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 ITGB1P05556 798 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 STAG3L1P0CL83 205 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 SIGLEC14Q08ET2 396 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 CBX2Q14781 532 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 TSHZ1Q6ZSZ6 1077 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 NLRX1Q86UT6 975 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 KLHL23Q8NBE8 558 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 MICAL1Q8TDZ2 1067 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 POF1BQ8WVV4 589 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 ATOH1Q92858 354 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 RPGRIP1Q96KN7 1286 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 PHF7Q9BWX1 381 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
MRPL40-202ENST00000443660 USP15Q9Y4E8 981 aaPredicted RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
MRPL40-202ENST00000443660 PNMA6FA0A0J9YX94 578 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 RPLP2P05387 115 aaKnown RBP17.14■□□□□ 0.33
MRPL40-202ENST00000443660 DNAJB1P25685 340 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 MGAT3Q09327 533 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 XRRA1Q6P2D8 792 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 ADGRD2Q7Z7M1 963 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 RIOX1Q9H6W3 641 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 TLE6Q9H808 572 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 TUBE1Q9UJT0 475 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 CDY2AQ9Y6F7 541 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 ZNF318Q5VUA4 2279 aa17.14■□□□□ 0.33
MRPL40-202ENST00000443660 RALGAPA2Q2PPJ7 1873 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms