RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 DHX16O60231 1041 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 CALM1P0DP23 149 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 CALM2P0DP24 149 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 CALM3P0DP25 149 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 HAND2P61296 217 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 GABPAQ06546 454 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 ADCK5Q3MIX3 580 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 LINC00114Q6XXX2 140 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 SGMS1Q86VZ5 419 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 TBC1D10CQ8IV04 446 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 ZNF444Q8N0Y2 327 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 CRACR2BQ8N4Y2 399 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 KLHL23Q8NBE8 558 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 UPF3BQ9BZI7 483 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 MKNK2Q9HBH9 465 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 CBX8Q9HC52 389 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 SRA1Q9HD15 236 aaKnown RBP8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 OSGEPQ9NPF4 335 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 TCP11L1Q9NUJ3 509 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 HACL1Q9UJ83 578 aa8.31□□□□□ -1.08
R3HDM1-210ENST00000443537 NEDD4P46934 1319 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 CCDC196A0A1B0GTZ2 297 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 TSPY2A6NKD2 308 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 PRC1O43663 620 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 HSP90AA1P07900 732 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 PICALMQ13492 652 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 DCAF15Q66K64 600 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 SYNE3Q6ZMZ3 975 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 STOX1Q6ZVD7 989 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 SULF2Q8IWU5 870 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 DTWD1Q8N5C7 304 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 BEND7Q8N7W2 519 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 KIF3AQ9Y496 699 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 NID2Q14112 1375 aa8.3□□□□□ -1.08
R3HDM1-210ENST00000443537 GOLGB1Q14789 3259 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 B4E1Z4 1266 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 RANBP6O60518 1105 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 PAGE1O75459 146 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CDKL5O76039 1030 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 TSPY3P0CV98 308 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 TSPY8P0CW00 308 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CDK8P49336 464 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 NLRP12P59046 1061 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 NFIAQ12857 509 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 AP3B2Q13367 1082 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 PWP1Q13610 501 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 SUZ12Q15022 739 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 SUPT20HL1Q3ZLR7 823 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 PRRT3Q5FWE3 981 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 PCNX4Q63HM2 1172 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 TTBK2Q6IQ55 1244 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CPLX2Q6PUV4 134 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 USP48Q86UV5 1035 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 ANKS1AQ92625 1134 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 DCPSQ96C86 337 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 MAP3K14Q99558 947 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 LLPHQ9BRT6 129 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CWC22Q9HCG8 908 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 DDX4Q9NQI0 724 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 IGSF5Q9NSI5 407 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 ZSWIM5Q9P217 1185 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
R3HDM1-210ENST00000443537 CNTNAP1P78357 1384 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 CCDC69A6NI79 296 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 SH2B2O14492 632 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 IFIT3O14879 490 aaKnown RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 DDAH1O94760 285 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 DDNO94850 711 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 CYP11A1P05108 521 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 NME2P22392 152 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 LIG3P49916 1009 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 PLCD1P51178 756 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 AK2P54819 239 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 TCP10Q12799 353 aa8.28□□□□□ -1.08
R3HDM1-210ENST00000443537 WTAPQ15007 396 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms