RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 CCDC170Q8IYT3 715 aa11.45□□□□□ -0.58
BRPF3-204ENST00000441730 ZFAND2BQ8WV99 257 aa11.45□□□□□ -0.58
BRPF3-204ENST00000441730 CLIP3Q96DZ5 547 aa11.45□□□□□ -0.58
BRPF3-204ENST00000441730 C6orf203Q9P0P8 240 aaPredicted RBP11.45□□□□□ -0.58
BRPF3-204ENST00000441730 VPS54Q9P1Q0 977 aa11.45□□□□□ -0.58
BRPF3-204ENST00000441730 CCDC159P0C7I6 412 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 SSRP1Q08945 709 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 TRIM29Q14134 588 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 NANOGNBQ7Z5D8 188 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 PDILTQ8N807 584 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 COA7Q96BR5 231 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 ZSCAN31Q96LW9 406 aaPredicted RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 ZNHIT6Q9NWK9 470 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 MAP3K20Q9NYL2 800 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 MTRF1O75570 445 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 ALOX15P16050 662 aaPredicted RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 KIF5BP33176 963 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 MCM2P49736 904 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 GBP7Q8N8V2 638 aaPredicted RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 ZC3H15Q8WU90 426 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 PIGSQ96S52 555 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 ALG1Q9BT22 464 aa11.44□□□□□ -0.58
BRPF3-204ENST00000441730 PAPOLBQ9NRJ5 636 aaKnown RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 TUBA8Q9NY65 449 aaPredicted RBP11.44□□□□□ -0.58
BRPF3-204ENST00000441730 GOLGA6L9A6NEM1 432 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 USP11P51784 963 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 NEK2P51955 445 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 SH3BGRP55822 239 aaPredicted RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 ERCC6LQ2NKX8 1250 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 ARHGAP29Q52LW3 1261 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 CYP4F22Q6NT55 531 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 ZNF280CQ8ND82 737 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 VMP1Q96GC9 406 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 COMMD8Q9NX08 183 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 ZMAT5Q9UDW3 170 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 TUBGCP4Q9UGJ1 667 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 SEC63Q9UGP8 760 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 CTNND1O60716 968 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 FGFR1OPO95684 399 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 BMP3P12645 472 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 PTPRAP18433 802 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 SEC23AQ15436 765 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 CEP112Q8N8E3 955 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 GDPD2Q9HCC8 539 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 DHX8Q14562 1220 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 AGAP9Q5VTM2 703 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 SPATS2Q86XZ4 545 aaKnown RBP11.43□□□□□ -0.58
BRPF3-204ENST00000441730 RASGRP4Q8TDF6 673 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 DNAI1Q9UI46 699 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 CROTQ9UKG9 612 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 IKBKGQ9Y6K9 419 aa11.43□□□□□ -0.58
BRPF3-204ENST00000441730 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 INHBCP55103 352 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 GALNT17Q6IS24 598 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 TRMT1LQ7Z2T5 733 aaKnown RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 FCHSD1Q86WN1 690 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 LMNTD2Q8IXW0 634 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 SRBD1Q8N5C6 995 aaKnown RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 DHTKD1Q96HY7 919 aaPredicted RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 EHD4Q9H223 541 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 PSMD7P51665 324 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 NLRP5P59047 1200 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 DMPKQ09013 629 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 TROAPQ12815 778 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 CST9Q5W186 159 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 TATDN1Q6P1N9 297 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 NEK10Q6ZWH5 1172 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 LRRC49Q8IUZ0 686 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 SLC7A5P1Q8MH63 180 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 CENPFP49454 3210 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 TMEM110-MUSTN1A8MSY1 372 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 PDHBP11177 359 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 ALAS1P13196 640 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 LIFRP42702 1097 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 COBLL1Q53SF7 1204 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 KIRREL3Q8IZU9 778 aa11.42□□□□□ -0.58
BRPF3-204ENST00000441730 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 PAIP2BQ9ULR5 123 aaKnown RBP11.42□□□□□ -0.58
BRPF3-204ENST00000441730 BRCA1P38398 1863 aaKnown RBP11.41□□□□□ -0.58
BRPF3-204ENST00000441730 PHF20L1A8MW92 1017 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms