RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TET1Q8NFU7 2136 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 C5orf67F2Z3F1 127 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 H3BNC9 293 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 CDC45O75419 566 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 KIF20AO95235 890 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 CFBP00751 764 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 HOXD11P31277 338 aaPredicted RBP6.9□□□□□ -1.31
PTPRR-204ENST00000440835 PKN1Q16512 942 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF618Q5T7W0 954 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 CUL5Q93034 780 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 TOP1MTQ969P6 601 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 INPP4AQ96PE3 977 aaPredicted RBP6.9□□□□□ -1.31
PTPRR-204ENST00000440835 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.31
PTPRR-204ENST00000440835 C16orf70Q9BSU1 422 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 SPZ1Q9BXG8 430 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 MLXIPQ9HAP2 919 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 MAD2L2Q9UI95 211 aa6.9□□□□□ -1.31
PTPRR-204ENST00000440835 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 NRCAMQ92823 1304 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 EPOPA6NHQ4 379 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 B4E1Z4 1266 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 H3BRB1 525 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 DDAH1O94760 285 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 GGPS1O95749 300 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 GOLGA8HP0CJ92 632 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 KIF5BP33176 963 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 NASPP49321 788 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 PCNX4Q63HM2 1172 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 NEK9Q8TD19 979 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 GPRASP2Q96D09 838 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 PABPC5Q96DU9 382 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 ALG1Q9BT22 464 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 LRFN3Q9BTN0 628 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 SUGCTQ9HAC7 445 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 KAT6AQ92794 2004 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 TCF20Q9UGU0 1960 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 NOP56O00567 594 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 OPLAHO14841 1288 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 LGALS2P05162 132 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 CALM1P0DP23 149 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 CALM2P0DP24 149 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 CALM3P0DP25 149 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 UBA1P22314 1058 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 KCNQ1P51787 676 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 CBX1P83916 185 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 ODR4Q5SWX8 454 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 TTC22Q5TAA0 569 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 FAM178BQ8IXR5 827 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 PPP2R3CQ969Q6 453 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 GTPBP4Q9BZE4 634 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 NSUN3Q9H649 340 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 DDX49Q9Y6V7 483 aaKnown RBP6.89□□□□□ -1.31
PTPRR-204ENST00000440835 MYO9BQ13459 2157 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 DNAH12Q6ZR08 3092 aa6.89□□□□□ -1.31
PTPRR-204ENST00000440835 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 RGS20O76081 388 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 SMIM10L2AP0DMW4 78 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 SMIM10L2BP0DMW5 78 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 PTGS1P23219 599 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 THPOP40225 353 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 ADAM17P78536 824 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 DEFB103AP81534 67 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF710Q8N1W2 664 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 NCOA7Q8NI08 942 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 C11orf84Q9BUA3 381 aaPredicted RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 FTHL17Q9BXU8 183 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 GLT8D2Q9H1C3 349 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 TTC28Q96AY4 2481 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 C19orf67A6NJJ6 358 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 MYCLP12524 364 aaPredicted RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 DDIT3P35638 169 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 TFF2Q03403 129 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 P2RX5Q93086 422 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 PRRX2Q99811 253 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
PTPRR-204ENST00000440835 NOL7Q9UMY1 257 aaKnown RBP6.88□□□□□ -1.31
PTPRR-204ENST00000440835 LETM1O95202 739 aaPredicted RBP6.87□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF286BP0CG31 522 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 MBTPS1Q14703 1052 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 WTAPQ15007 396 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 EPC2Q52LR7 807 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 CHST3Q7LGC8 479 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 TMEM192Q8IY95 271 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 DBF4BQ8NFT6 615 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 GDPD5Q8WTR4 605 aa6.87□□□□□ -1.31
PTPRR-204ENST00000440835 CLP1Q92989 425 aaKnown RBP6.87□□□□□ -1.31
PTPRR-204ENST00000440835 RRP36Q96EU6 259 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms