RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 CBX1P83916 185 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 PPATQ06203 517 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 CCDC65Q8IXS2 484 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
IFT140-204ENST00000439987 PDCD2LQ9BRP1 358 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 SRRTQ9BXP5 876 aaKnown RBP16.61■□□□□ 0.25
IFT140-204ENST00000439987 UNC45AQ9H3U1 944 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 JADE2Q9NQC1 790 aa16.61■□□□□ 0.25
IFT140-204ENST00000439987 TEX33O43247 280 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 SLITRK3O94933 977 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 CSGALNACT2Q8N6G5 542 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 IRF6O14896 467 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 TBX2Q13207 712 aaPredicted RBP16.6■□□□□ 0.25
IFT140-204ENST00000439987 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
IFT140-204ENST00000439987 FAM26FQ5R3K3 315 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 ARHGEF16Q5VV41 709 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 ERO1BQ86YB8 467 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 PDCL2Q8N4E4 241 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
IFT140-204ENST00000439987 PURBQ96QR8 312 aaKnown RBP16.6■□□□□ 0.25
IFT140-204ENST00000439987 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
IFT140-204ENST00000439987 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 EYA4O95677 639 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 MUTP22033 750 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 EEF1GP26641 437 aaKnown RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 MTMR1Q13613 665 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 EPHA7Q15375 998 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 EAPPQ56P03 285 aaPredicted RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 TAF3Q5VWG9 929 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 SEMA6BQ9H3T3 888 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 ACAD9Q9H845 621 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 SCN4AP35499 1836 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 N4BP3O15049 544 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 GRIN3BO60391 1043 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 MYCLP12524 364 aaPredicted RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 PBX1P40424 430 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 TTLL12Q14166 644 aaPredicted RBP16.59■□□□□ 0.25
IFT140-204ENST00000439987 PLS1Q14651 629 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
IFT140-204ENST00000439987 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.25
IFT140-204ENST00000439987 DHX15O43143 795 aaKnown RBP16.58■□□□□ 0.25
IFT140-204ENST00000439987 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.25
IFT140-204ENST00000439987 RAD51AP2Q09MP3 1159 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 XRRA1Q6P2D8 792 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.25
IFT140-204ENST00000439987 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.25
IFT140-204ENST00000439987 GLIS3Q8NEA6 775 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 MAF1Q9H063 256 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.25
IFT140-204ENST00000439987 SPDYE5A6NIY4 337 aa16.58■□□□□ 0.24
IFT140-204ENST00000439987 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
IFT140-204ENST00000439987 GIT2Q14161 759 aa16.58■□□□□ 0.24
IFT140-204ENST00000439987 HERC4Q5GLZ8 1057 aaPredicted RBP16.58■□□□□ 0.24
IFT140-204ENST00000439987 VPS16Q9H269 839 aa16.58■□□□□ 0.24
IFT140-204ENST00000439987 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 LRRC41Q15345 812 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 MYOCDQ8IZQ8 938 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 PIGOQ8TEQ8 1089 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 REEP2Q9BRK0 252 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
IFT140-204ENST00000439987 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
IFT140-204ENST00000439987 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
IFT140-204ENST00000439987 CXCL11O14625 94 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 NRDCO43847 1150 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 LRRC63Q05C16 580 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 VSIG10LQ86VR7 867 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
IFT140-204ENST00000439987 ANKRD7Q92527 254 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 TBC1D22BQ9NU19 505 aa16.57■□□□□ 0.24
IFT140-204ENST00000439987 NR3C2P08235 984 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 CCND2P30279 289 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 FOXR2Q6PJQ5 311 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
IFT140-204ENST00000439987 FAM114A1Q8IWE2 563 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 MB21D1Q8N884 522 aa16.56■□□□□ 0.24
IFT140-204ENST00000439987 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms