RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 REEP2Q9BRK0 252 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 PXMP2Q9NR77 195 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 ATP9AO75110 1047 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 CYP3A4P08684 503 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 ZNF18P17022 549 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 SETQ01105 290 aaPredicted RBP16.73■□□□□ 0.27
CPSF7-205ENST00000439958 ARMCX5Q6P1M9 558 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 PITPNM2Q9BZ72 1349 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 B4DLN1 442 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 BACH1O14867 736 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 TPM1P09493 284 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 BICDL2A1A5D9 508 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 VSTM4Q8IW00 320 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 TSG101Q99816 390 aa16.73■□□□□ 0.27
CPSF7-205ENST00000439958 PGK2P07205 417 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 CYP2C8P10632 490 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 NSUN6Q8TEA1 469 aaKnown RBP16.72■□□□□ 0.27
CPSF7-205ENST00000439958 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
CPSF7-205ENST00000439958 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 TMX1Q9H3N1 280 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 ARFGEF1Q9Y6D6 1849 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 USO1O60763 962 aaKnown RBP16.72■□□□□ 0.27
CPSF7-205ENST00000439958 PSMD10O75832 226 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
CPSF7-205ENST00000439958 SLITRK3O94933 977 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 CCNE1P24864 410 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
CPSF7-205ENST00000439958 KSR1Q8IVT5 923 aa16.72■□□□□ 0.27
CPSF7-205ENST00000439958 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 NOC4LQ9BVI4 516 aaKnown RBP16.71■□□□□ 0.27
CPSF7-205ENST00000439958 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-205ENST00000439958 CCND2P30279 289 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-205ENST00000439958 BTBD7Q9P203 1132 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 SPAG1Q07617 926 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 KIAA1524Q8TCG1 905 aa16.71■□□□□ 0.27
CPSF7-205ENST00000439958 DHTKD1Q96HY7 919 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-205ENST00000439958 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 DNAJC19Q96DA6 116 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 SEMA6BQ9H3T3 888 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-205ENST00000439958 PVALEFA0A1B0GWK0 134 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 ARSHQ5FYA8 562 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 CEP135Q66GS9 1140 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 HERVK_113P62684 666 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 PCNX4Q63HM2 1172 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
CPSF7-205ENST00000439958 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
CPSF7-205ENST00000439958 ATAD5Q96QE3 1844 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CELF2O95319 508 aaKnown RBP16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CASP5P51878 434 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 TBC1D8BQ0IIM8 1120 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 AGO4Q9HCK5 861 aaKnown RBP16.69■□□□□ 0.26
CPSF7-205ENST00000439958 JADE2Q9NQC1 790 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CLIC2O15247 247 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 FDX1P10109 184 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CASP14P31944 242 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 RBL2Q08999 1139 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 FSTL1Q12841 308 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 NOL9Q5SY16 702 aaKnown RBP16.69■□□□□ 0.26
CPSF7-205ENST00000439958 CDKAL1Q5VV42 579 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 IMPACTQ9P2X3 320 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 NPEPPSP55786 919 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 PPATQ06203 517 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 XKR9Q5GH70 373 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 ODR4Q5SWX8 454 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 SPATC1LQ9H0A9 340 aa16.69■□□□□ 0.26
CPSF7-205ENST00000439958 MYBP10242 640 aa16.68■□□□□ 0.26
CPSF7-205ENST00000439958 NMT1P30419 496 aaKnown RBP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 ENOX2Q16206 610 aaKnown RBP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 C12orf42Q96LP6 360 aa16.68■□□□□ 0.26
CPSF7-205ENST00000439958 NKRFO15226 690 aaKnown RBP eCLIP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
CPSF7-205ENST00000439958 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
CPSF7-205ENST00000439958 CRACR2AQ9BSW2 395 aa16.68■□□□□ 0.26
CPSF7-205ENST00000439958 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
CPSF7-205ENST00000439958 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
CPSF7-205ENST00000439958 ZNF500O60304 480 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms