RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RBM12Q9NTZ6 932 aaKnown RBP9.44□□□□□ -0.9
HPS4-206ENST00000439453 PSMA7O14818 248 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 PLEKP08567 350 aaPredicted RBP9.44□□□□□ -0.9
HPS4-206ENST00000439453 FAM153BP0C7A2 387 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 STAT6P42226 847 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 FUT2Q10981 343 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 NPY5RQ15761 445 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 FAM153CQ494X1 144 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
HPS4-206ENST00000439453 CD302Q8IX05 232 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 NOC3LQ8WTT2 800 aaKnown RBP9.44□□□□□ -0.9
HPS4-206ENST00000439453 FAM153AQ9UHL3 310 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 NFU1Q9UMS0 254 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 FZD1Q9UP38 647 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 FAM107AO95990 144 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 SCP2P22307 547 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 MCM7P33993 719 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 CARSP49589 748 aaKnown RBP9.44□□□□□ -0.9
HPS4-206ENST00000439453 DRP2Q13474 957 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 WLSQ5T9L3 541 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 TTI2Q6NXR4 508 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 C6orf89Q6UWU4 347 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 PIK3R5Q8WYR1 880 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 ALS2CR12Q96Q35 445 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 DEFB129Q9H1M3 183 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 GDF3Q9NR23 364 aa9.44□□□□□ -0.9
HPS4-206ENST00000439453 NCK2O43639 380 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CDR1P51861 262 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 PAK2Q13177 524 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 SEC23AQ15436 765 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 N4BP2L2Q92802 583 aaPredicted RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 ATP6V1G3Q96LB4 118 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 TMEM39BQ9GZU3 492 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 TLL2Q9Y6L7 1015 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 A0A1W2PQJ5 194 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 SRRM3A6NNA2 597 aaPredicted RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 E7EVH7 732 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CLSTN1O94985 981 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 PLEKHA8P1O95397 391 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 GLI1P08151 1106 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 BTDP43251 543 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 MAP3K12Q12852 859 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 FKBP1CQ5VVH2 108 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 MOB2Q70IA6 237 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CSGALNACT2Q8N6G5 542 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 IFT81Q8WYA0 676 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 DUSP9Q99956 384 aaKnown RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 RIOK1Q9BRS2 568 aaKnown RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 IDI2Q9BXS1 227 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 VEZTQ9HBM0 779 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 TNKSO95271 1327 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 ATP2B2Q01814 1243 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 KCNB1Q14721 858 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 SPTY2D1Q68D10 685 aaPredicted RBP9.43□□□□□ -0.9
HPS4-206ENST00000439453 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CCDC121Q6ZUS5 278 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 MREGQ8N565 214 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 MIEF2Q96C03 454 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 CCDC114Q96M63 670 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 EPB41L5Q9HCM4 733 aa9.43□□□□□ -0.9
HPS4-206ENST00000439453 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 MTIF2P46199 727 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 GUCY2FP51841 1108 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 KIF11P52732 1056 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 RBM5P52756 815 aaKnown RBP eCLIP9.42□□□□□ -0.9
HPS4-206ENST00000439453 RASA3Q14644 834 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 FIGNQ5HY92 759 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 NBPF12Q5TAG4 269 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 LCORLQ8N3X6 602 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 C1orf131Q8NDD1 294 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 EEF2KMTQ96G04 330 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 ARHGAP20Q9P2F6 1191 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 ESYT3A0FGR9 886 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 TMCO5BA8MYB1 307 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 KLRC4O43908 158 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 HEXIM1O94992 359 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 SLURP2P0DP57 97 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 PPP4CP60510 307 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 GUCY2DQ02846 1103 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 SNCBQ16143 134 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 PPP4R3AQ6IN85 833 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 SULF1Q8IWU6 871 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms