RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
NEK1-201ENST00000439128 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
NEK1-201ENST00000439128 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 AGBL3Q8NEM8 1001 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
NEK1-201ENST00000439128 CDC25AP30304 524 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 MAP1SQ66K74 1059 aaPredicted RBP13.16□□□□□ -0.3
NEK1-201ENST00000439128 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 PALM2Q8IXS6 379 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
NEK1-201ENST00000439128 NEMP1O14524 444 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 MTX1Q13505 466 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 TMTC1Q8IUR5 882 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 NAPGQ99747 312 aaPredicted RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 WDR46O15213 610 aaKnown RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 MMP1P03956 469 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 FBXO18Q8NFZ0 1043 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 ATP5DP30049 168 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 GNASQ5JWF2 1037 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 ZNF34Q8IZ26 560 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEK1-201ENST00000439128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEK1-201ENST00000439128 SAMD15Q9P1V8 674 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
NEK1-201ENST00000439128 CEP152O94986 1710 aa13.15□□□□□ -0.3
NEK1-201ENST00000439128 MED14O60244 1454 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 ENTPD3O75355 529 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.31
NEK1-201ENST00000439128 GH1P01241 217 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 IVLP07476 585 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 ARL4AP40617 200 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 RGS2P41220 211 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.31
NEK1-201ENST00000439128 FAM184BQ9ULE4 1060 aa13.15□□□□□ -0.31
NEK1-201ENST00000439128 NEDD4P46934 1319 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 LRRN2O75325 713 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 NNMTP40261 264 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 RWDD4Q6NW29 188 aaKnown RBP13.14□□□□□ -0.31
NEK1-201ENST00000439128 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
NEK1-201ENST00000439128 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 SFNP31947 248 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 ZNF667Q5HYK9 610 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 GLT1D1Q96MS3 346 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
NEK1-201ENST00000439128 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 DYDC2Q96IM9 177 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 SLC9A2Q9UBY0 812 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 CDC42BPAQ5VT25 1732 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 S100BP04271 92 aaPredicted RBP13.14□□□□□ -0.31
NEK1-201ENST00000439128 CMA1P23946 247 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 LPAR1Q92633 364 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
NEK1-201ENST00000439128 CHMP6Q96FZ7 201 aa13.14□□□□□ -0.31
NEK1-201ENST00000439128 NT5C2P49902 561 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
NEK1-201ENST00000439128 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 CBX8Q9HC52 389 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 GYS1P13807 737 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 NFKBIAP25963 317 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 FOXO4P98177 505 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 ARL13BQ3SXY8 428 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 PHLDB2Q86SQ0 1253 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
NEK1-201ENST00000439128 KRT12Q99456 494 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 SLC25A27O95847 323 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
NEK1-201ENST00000439128 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 POLR3FQ9H1D9 316 aaPredicted RBP13.13□□□□□ -0.31
NEK1-201ENST00000439128 UBE2TQ9NPD8 197 aaPredicted RBP13.13□□□□□ -0.31
NEK1-201ENST00000439128 TUBB4AP04350 444 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 VPS41P49754 854 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 GPC3P51654 580 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 ALCAMQ13740 583 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms