RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 A0A0G2JND7 137 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 GOLGA8JA6NMD2 632 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 KHDRBS2Q5VWX1 349 aaKnown RBP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 TBC1D4O60343 1298 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 NBNO60934 754 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 LIG4P49917 911 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 HIC1Q14526 733 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ST13P5Q8NFI4 369 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 FAM210AQ96ND0 272 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 MED10Q9BTT4 135 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PPCSQ9HAB8 311 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 TRADDQ15628 312 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 CNGA2Q16280 664 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 EPAS1Q99814 870 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 CCDC90BQ9GZT6 254 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 AP4S1Q9Y587 144 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 H0Y3Z8 333 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 OR52Z1P0C646 297 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ARL4CP56559 192 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 YWHAHQ04917 246 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 CYP4F22Q6NT55 531 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 KBTBD3Q8NAB2 608 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 EPN3Q9H201 632 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 EML4Q9HC35 981 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 PCDHA13Q9Y5I0 950 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 MESDQ14696 234 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 RASA4BC9J798 803 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 RASA4O43374 803 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 GAS7O60861 476 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 GGPS1O95749 300 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 CYP2J2P51589 502 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ZNF658Q5TYW1 1059 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 DDHD1Q8NEL9 900 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 UHMK1Q8TAS1 419 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 STRNO43815 780 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 NDUFA10O95299 355 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 KCNA3P22001 575 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 EXOC8Q8IYI6 725 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ATP6V1G3Q96LB4 118 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 PARVGQ9HBI0 331 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 HOXB7P09629 217 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 COPS2P61201 443 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 INAQ16352 499 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 FAM178BQ8IXR5 827 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 PHF21AQ96BD5 680 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 COQ7Q99807 217 aa12.37□□□□□ -0.43
PTCH1-209ENST00000437951 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
PTCH1-209ENST00000437951 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 GPAA1O43292 621 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 SLC5A4Q9NY91 659 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 TBK1Q9UHD2 729 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 KDRP35968 1356 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 hCG_2014768A0A024R1R8 64 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 DARS2Q6PI48 645 aaKnown RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 SH3GL1Q99961 368 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 PSD3Q9NYI0 1048 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 KDM5AP29375 1690 aaKnown RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ACADSP16219 412 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 ATP2B4P23634 1241 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 GGCXP38435 758 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
PTCH1-209ENST00000437951 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 DNAAF3Q8N9W5 541 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
PTCH1-209ENST00000437951 BTBD6Q96KE9 485 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms