RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 KCNG4Q8TDN1 519 aa18.91■□□□□ 0.62
CALD1-209ENST00000436461 ARMC5Q96C12 935 aa18.91■□□□□ 0.62
CALD1-209ENST00000436461 DEFB118Q96PH6 123 aa18.91■□□□□ 0.62
CALD1-209ENST00000436461 GPR20Q99678 358 aa18.91■□□□□ 0.62
CALD1-209ENST00000436461 SCAND2PQ9GZW5 306 aaPredicted RBP18.91■□□□□ 0.62
CALD1-209ENST00000436461 XPNPEP3Q9NQH7 507 aa18.91■□□□□ 0.62
CALD1-209ENST00000436461 SRPRBQ9Y5M8 271 aaKnown RBP18.91■□□□□ 0.62
CALD1-209ENST00000436461 GSTTP1A0A1W2PQM5 241 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 NOP56O00567 594 aaKnown RBP18.9■□□□□ 0.62
CALD1-209ENST00000436461 CTAGE5O15320 804 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
CALD1-209ENST00000436461 KRT76Q01546 638 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 LAMC2Q13753 1193 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 USP49Q70CQ1 688 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 MIER3Q7Z3K6 550 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 KRI1Q8N9T8 703 aaKnown RBP18.9■□□□□ 0.62
CALD1-209ENST00000436461 AP5M1Q9H0R1 490 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 PAK6Q9NQU5 681 aaPredicted RBP18.9■□□□□ 0.62
CALD1-209ENST00000436461 ELP1O95163 1332 aa18.9■□□□□ 0.62
CALD1-209ENST00000436461 ADAMTS4O75173 837 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 TCF7P36402 384 aaPredicted RBP18.89■□□□□ 0.62
CALD1-209ENST00000436461 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.62
CALD1-209ENST00000436461 TRIM50Q86XT4 487 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 IGSF22Q8N9C0 903 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 EMID1Q96A84 441 aaPredicted RBP18.89■□□□□ 0.62
CALD1-209ENST00000436461 FERMT2Q96AC1 680 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 DISC1Q9NRI5 854 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 TCEAL9Q9UHQ7 104 aa18.89■□□□□ 0.62
CALD1-209ENST00000436461 MMP3P08254 477 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 GJA9P57773 515 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 CYP4A11Q02928 519 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 AXDND1Q5T1B0 1012 aaPredicted RBP18.89■□□□□ 0.61
CALD1-209ENST00000436461 UTP14CQ5TAP6 766 aaKnown RBP18.89■□□□□ 0.61
CALD1-209ENST00000436461 COL13A1Q5TAT6 717 aaPredicted RBP18.89■□□□□ 0.61
CALD1-209ENST00000436461 PPTC7Q8NI37 304 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 RGL1Q9NZL6 768 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 LRWD1Q9UFC0 647 aa18.89■□□□□ 0.61
CALD1-209ENST00000436461 MYH9P35579 1960 aaKnown RBP18.88■□□□□ 0.61
CALD1-209ENST00000436461 WDR64B1ANS9 1081 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 ZNF286BP0CG31 522 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 FSCN1Q16658 493 aaKnown RBP18.88■□□□□ 0.61
CALD1-209ENST00000436461 ABHD15Q6UXT9 468 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 TRMT1LQ7Z2T5 733 aaKnown RBP18.88■□□□□ 0.61
CALD1-209ENST00000436461 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
CALD1-209ENST00000436461 BANK1Q8NDB2 785 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 SEPT1Q8WYJ6 367 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 Q9Y3F1 56 aa18.88■□□□□ 0.61
CALD1-209ENST00000436461 MORC2Q9Y6X9 1032 aaPredicted RBP18.88■□□□□ 0.61
CALD1-209ENST00000436461 MSCO60682 206 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 ZRSR1Q15695 479 aaKnown RBP18.87■□□□□ 0.61
CALD1-209ENST00000436461 UGCGQ16739 394 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 GNASQ5JWF2 1037 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 SHC4Q6S5L8 630 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 SYMPKQ92797 1274 aaKnown RBP18.87■□□□□ 0.61
CALD1-209ENST00000436461 DYDC2Q96IM9 177 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 PCYT2Q99447 389 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 EIF2AK1Q9BQI3 630 aaKnown RBP18.87■□□□□ 0.61
CALD1-209ENST00000436461 UPF3AQ9H1J1 476 aaKnown RBP18.87■□□□□ 0.61
CALD1-209ENST00000436461 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
CALD1-209ENST00000436461 MKI67P46013 3256 aaKnown RBP18.87■□□□□ 0.61
CALD1-209ENST00000436461 A6NJR5 290 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 CUTAO60888 179 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
CALD1-209ENST00000436461 MED24O75448 989 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 ATG7O95352 703 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 SUPT20HL2P0C7V6 817 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 JAK3P52333 1124 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 CTTNQ14247 550 aaKnown RBP18.86■□□□□ 0.61
CALD1-209ENST00000436461 PDIA5Q14554 519 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 ECM1Q16610 540 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 CLEC17AQ6ZS10 378 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 SMAP1Q8IYB5 467 aaPredicted RBP18.86■□□□□ 0.61
CALD1-209ENST00000436461 SNX29Q8TEQ0 813 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 PPP1R13LQ8WUF5 828 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 GBP4Q96PP9 640 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 PLIN2Q99541 437 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 MMTAG2Q9BU76 263 aaKnown RBP18.86■□□□□ 0.61
CALD1-209ENST00000436461 RAB34Q9BZG1 259 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 WRAP73Q9P2S5 460 aaPredicted RBP18.86■□□□□ 0.61
CALD1-209ENST00000436461 GABBR1Q9UBS5 961 aa18.86■□□□□ 0.61
CALD1-209ENST00000436461 A0A087WWV3 80 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 BACH1O14867 736 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 MYL3P08590 195 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 SFNP31947 248 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 LONP1P36776 959 aaKnown RBP18.85■□□□□ 0.61
CALD1-209ENST00000436461 CPT1AP50416 773 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 EPHA7Q15375 998 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 MIS18BP1Q6P0N0 1132 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 SPC25Q9HBM1 224 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 PRPF40AO75400 957 aaKnown RBP18.85■□□□□ 0.61
CALD1-209ENST00000436461 LGALS2P05162 132 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 PSAPP07602 524 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 MARK3P27448 753 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 LRRC41Q15345 812 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 DGKDQ16760 1214 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
CALD1-209ENST00000436461 KLHDC9Q8NEP7 349 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms