RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ZNF658Q5TYW1 1059 aaPredicted RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 PSPC1Q8WXF1 523 aaKnown RBP17.01■□□□□ 0.31
NEDD4-202ENST00000435532 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 KYAT1Q16773 422 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 RYBPQ8N488 228 aaPredicted RBP17■□□□□ 0.31
NEDD4-202ENST00000435532 PCIF1Q9H4Z3 704 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 DPYSL4O14531 572 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 TSPY1Q01534 308 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 GOLGA8FQ08AF8 430 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 GOLGA8DPQ0D2H9 430 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 ATP2A3Q93084 1043 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 CCDC68Q9H2F9 335 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 CCL15-CCL14A0A0B4J2E2 113 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 OSTNP61366 133 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 CCL15Q16663 113 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 NBPF11Q86T75 865 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 BEST2Q8NFU1 509 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 AFG3L2Q9Y4W6 797 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 H2AFZP0C0S5 128 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 EEF1GP26641 437 aaKnown RBP17■□□□□ 0.31
NEDD4-202ENST00000435532 NDUFA8P51970 172 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 H2AFVQ71UI9 128 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 TRIM58Q8NG06 486 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 P3H4Q92791 437 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 DDX23Q9BUQ8 820 aaKnown RBP17■□□□□ 0.31
NEDD4-202ENST00000435532 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
NEDD4-202ENST00000435532 FCGRTP55899 365 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 NXF1Q9UBU9 619 aaKnown RBP16.99■□□□□ 0.31
NEDD4-202ENST00000435532 NEDD4P46934 1319 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 GTF2A2P52657 109 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 FKBP3Q00688 224 aaKnown RBP16.99■□□□□ 0.31
NEDD4-202ENST00000435532 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 ADARB2Q9NS39 739 aaKnown RBP16.99■□□□□ 0.31
NEDD4-202ENST00000435532 SRPRBQ9Y5M8 271 aaKnown RBP16.99■□□□□ 0.31
NEDD4-202ENST00000435532 SETDB1Q15047 1291 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 FYB2Q5VWT5 728 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 SNAP23O00161 211 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 STK25O00506 426 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
NEDD4-202ENST00000435532 PHBP35232 272 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 ATRIPQ8WXE1 791 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 SLITRK6Q9H5Y7 841 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 SETD1BQ9UPS6 1966 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 F8W8V4 182 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 SLFN14P0C7P3 912 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 TBC1D10CQ8IV04 446 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 KIDINS220Q9ULH0 1771 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 DYNC1I1O14576 645 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 VIMP08670 466 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 RABL6Q3YEC7 729 aaPredicted RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 CCDC110Q8TBZ0 833 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 ANAPC5Q9UJX4 755 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 HEXIM1O94992 359 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 P4HBP07237 508 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 PEX3P56589 373 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 MTMR3Q13615 1198 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 RUNDC3BQ96NL0 473 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 SLC44A5Q8NCS7 719 aa16.98■□□□□ 0.31
NEDD4-202ENST00000435532 HEXIM2Q96MH2 286 aaKnown RBP16.98■□□□□ 0.31
NEDD4-202ENST00000435532 COPB1P53618 953 aaKnown RBP16.97■□□□□ 0.31
NEDD4-202ENST00000435532 MAN2A1Q16706 1144 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 DONSONQ9NYP3 566 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 SAMD15Q9P1V8 674 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
NEDD4-202ENST00000435532 PLCG1P19174 1290 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 MXI1P50539 228 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 NR5A1Q13285 461 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 QRICH1Q2TAL8 776 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 ARL13BQ3SXY8 428 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 TTC1Q99614 292 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 LMCD1Q9NZU5 365 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 ARL4AP40617 200 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
NEDD4-202ENST00000435532 PALM2Q8IXS6 379 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 BBOF1Q8ND07 529 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 PIDD1Q9HB75 910 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 PFASO15067 1338 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 CLIC2O15247 247 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 HDLBPQ00341 1268 aaKnown RBP16.97■□□□□ 0.31
NEDD4-202ENST00000435532 SKIV2LQ15477 1246 aaKnown RBP16.97■□□□□ 0.31
NEDD4-202ENST00000435532 KLHL7Q8IXQ5 586 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 TUBGCP2Q9BSJ2 902 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
NEDD4-202ENST00000435532 MYO1FO00160 1098 aa16.96■□□□□ 0.31
NEDD4-202ENST00000435532 CLDN3O15551 220 aa16.96■□□□□ 0.31
NEDD4-202ENST00000435532 DTNBO60941 627 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms