RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 SYCP3Q8IZU3 236 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 FBF1Q8TES7 1133 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 STRBPQ96SI9 672 aaKnown RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 KCNK9Q9NPC2 374 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 COPS2P61201 443 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 POLR2FP61218 127 aaKnown RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CUL3Q13618 768 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 PKN1Q16512 942 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 MTMR3Q13615 1198 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 CUL1Q13616 776 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 CCDC25Q86WR0 208 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 CNOT10Q9H9A5 744 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 DISC1Q9NRI5 854 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 PLEKHG1Q9ULL1 1385 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 PAEPP09466 180 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 LRRC41Q15345 812 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 SLC9C1Q4G0N8 1177 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 AMOTQ4VCS5 1084 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 VWA3BQ502W6 1294 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 C1orf131Q8NDD1 294 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 FAM89AQ96GI7 184 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 SNX24Q9Y343 169 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 GRID2IPA4D2P6 1211 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 ECEL1O95672 775 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 BMP15O95972 392 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 ERFP50548 548 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 CABP4P57796 275 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 NAALADL2Q58DX5 795 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 DYMQ7RTS9 669 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 PIGWQ7Z7B1 504 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 SYNE4Q8N205 404 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 KLHL23Q8NBE8 558 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 UCMAQ8WVF2 138 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 FMO2Q99518 471 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 NSRP1Q9H0G5 558 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 TNKSO95271 1327 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 FAM114A1Q8IWE2 563 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 GALNT15Q8N3T1 639 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 IFT74Q96LB3 600 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 TMEM237Q96Q45 408 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 ERGIC2Q96RQ1 377 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 KCNMB3Q9NPA1 279 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 NOC2LQ9Y3T9 749 aaKnown RBP8.12□□□□□ -1.11
CPSF6-202ENST00000435070 KLRC4O43908 158 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 PHKA1P46020 1223 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 FAM133AQ8N9E0 248 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 GORASP1Q9BQQ3 440 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 PHF20Q9BVI0 1012 aa8.12□□□□□ -1.11
CPSF6-202ENST00000435070 SNX3O60493 162 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CREB1P16220 341 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SLC29A2Q14542 456 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 LLGL1Q15334 1064 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 MEI1Q5TIA1 1274 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 DTHD1Q6ZMT9 781 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 MIGA2Q7L4E1 593 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 GIMAP8Q8ND71 665 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 GLG1Q92896 1179 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CFAP57Q96MR6 1250 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 KRT23Q9C075 422 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CHCHD3Q9NX63 227 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 NR2E1Q9Y466 385 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 AFF2P51816 1311 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ITIH4Q14624 930 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 MUM1Q2TAK8 710 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SLC4A8Q2Y0W8 1093 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 DENND2CQ68D51 928 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 RNF10Q8N5U6 811 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 FITM2Q8N6M3 262 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ATXN2LQ8WWM7 1075 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CYP2D7A0A087X1C5 515 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SUN1O94901 812 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SNRPA1P09661 255 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CNGA1P29973 690 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ZNF449Q6P9G9 518 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 VSIG1Q86XK7 387 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 METTL13Q8N6R0 699 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 NUDCD1Q96RS6 583 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PCMTD2Q9NV79 361 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 IQSEC3Q9UPP2 1182 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 UTP11Q9Y3A2 253 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms