RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SFMBT2Q5VUG0 894 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 FBXO38Q6PIJ6 1188 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 PAGR1Q9BTK6 254 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 CCDC88AQ3V6T2 1871 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 K7ENM7 598 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 IPO5O00410 1097 aaKnown RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 NMT1P30419 496 aaKnown RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 HMGCS2P54868 508 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 TBX2Q13207 712 aaPredicted RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 SLC9C1Q4G0N8 1177 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 CEP55Q53EZ4 464 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 PRPF38AQ8NAV1 312 aaKnown RBP13.41□□□□□ -0.26
CLDN4-203ENST00000435050 FRMD4BQ9Y2L6 1034 aa13.41□□□□□ -0.26
CLDN4-203ENST00000435050 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 KRT13P13646 458 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 CYP11B2P19099 503 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 CEP112Q8N8E3 955 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 MKL1Q969V6 931 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 TIAM2Q8IVF5 1701 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 SEC31AO94979 1220 aaKnown RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 PSMD2Q13200 908 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 FAM102BQ5T8I3 360 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 EHBP1Q8NDI1 1231 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 NFIBO00712 420 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 ERLIN1O75477 346 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 MYBP10242 640 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 GPS2Q13227 327 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 SKIDA1Q1XH10 827 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 VPS36Q86VN1 386 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 FAM133AQ8N9E0 248 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 GDAP1L1Q96MZ0 367 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 RMDN3Q96TC7 470 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 RPAP3Q9H6T3 665 aaPredicted RBP13.4□□□□□ -0.26
CLDN4-203ENST00000435050 ARFGAP3Q9NP61 516 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
CLDN4-203ENST00000435050 SRGAP2O75044 1071 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 ARP10275 920 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 ASIC2Q16515 512 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 TAF4BQ92750 862 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 HSP90B2PQ58FF3 399 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 AGBL3Q8NEM8 1001 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 HDAC6Q9UBN7 1215 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 ZC2HC1CQ53FD0 456 aaPredicted RBP13.39□□□□□ -0.27
CLDN4-203ENST00000435050 CXCR5P32302 372 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 LXNQ9BS40 222 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 MRIQ9BWK5 157 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 WDR11Q9BZH6 1224 aa13.39□□□□□ -0.27
CLDN4-203ENST00000435050 EML1O00423 815 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 EGFRP00533 1210 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 SREBF1P36956 1147 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 PRELPP51888 382 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 APBA1Q02410 837 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 NACC1Q96RE7 527 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 FKBP1AP62942 108 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 MTMR1Q13613 665 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 BMS1Q14692 1282 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 EXOC3L4Q17RC7 722 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 FGFBP2Q9BYJ0 223 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 CAPN11Q9UMQ6 739 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 PRPF4BQ13523 1007 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 SNRNP48Q6IEG0 339 aaKnown RBP13.38□□□□□ -0.27
CLDN4-203ENST00000435050 TXLNBQ8N3L3 684 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms