RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 KIF5CO60282 957 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 TRIM21P19474 475 aaKnown RBP13.25□□□□□ -0.29
CTCFL-209ENST00000433949 PRR16Q569H4 304 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 LPAR1Q92633 364 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 DESI2Q9BSY9 194 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 MYO1AQ9UBC5 1043 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 KIAA1024Q9UPX6 916 aa13.25□□□□□ -0.29
CTCFL-209ENST00000433949 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 TTC26A0AVF1 554 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 B4DLN1 442 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 C19orf81C9J6K1 198 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 RPA1P27694 616 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 COASYQ13057 564 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 MTF1Q14872 753 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 ECM1Q16610 540 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 FAM26FQ5R3K3 315 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 ZNF397Q8NF99 534 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 WNK4Q96J92 1243 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 PEX10O60683 326 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 URI1O94763 535 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 PLA2G4BP0C869 781 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 SPIRE1Q08AE8 756 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 TUBB2AQ13885 445 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 LENG9Q96B70 501 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 TUBB2BQ9BVA1 445 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 ZNHIT6Q9NWK9 470 aaKnown RBP13.24□□□□□ -0.29
CTCFL-209ENST00000433949 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
CTCFL-209ENST00000433949 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 OPLAHO14841 1288 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 ZNF76P36508 570 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 ERVK-24P63145 666 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 ZBED6P86452 979 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MAN2A1Q16706 1144 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MIIPQ5JXC2 388 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 TTYH3Q9C0H2 523 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MRPL11Q9Y3B7 192 aaKnown RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 POTEB3A0JP26 581 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 E9PMD0 336 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 GNA14O95837 355 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 MEA1Q16626 185 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 POTEBQ6S5H4 581 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
CTCFL-209ENST00000433949 EPN1Q9Y6I3 576 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-209ENST00000433949 FRMD3A2A2Y4 597 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 FAM86B1E9PN63 330 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 GCOM1H8Y6P7 765 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 TOMM70O94826 608 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 FAM86B2P0C5J1 330 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 POLR2MP0CAP2 368 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 FKBP1BP68106 108 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 CDK17Q00537 523 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 PPIL2Q13356 520 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 GPBP1Q86WP2 473 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 GJA10Q969M2 543 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 CEP63Q96MT8 703 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 WDR24Q96S15 920 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 P2RX7Q99572 595 aaKnown RBP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-209ENST00000433949 NDST4Q9H3R1 872 aa13.22□□□□□ -0.29
CTCFL-209ENST00000433949 RNF225M0QZC1 329 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 MED24O75448 989 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 NDUFA10O95299 355 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 CYP11B2P19099 503 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 SLC12A3P55017 1021 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 KRT83P78385 493 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 CCDC170Q8IYT3 715 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 SYT2Q8N9I0 419 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
CTCFL-209ENST00000433949 LZTFL1Q9NQ48 299 aa13.21□□□□□ -0.29
CTCFL-209ENST00000433949 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms