RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 KRT86O43790 486 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 PPP1R2P41236 205 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 ARID5AQ03989 594 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 GIT2Q14161 759 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 PDXDC1Q6P996 788 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 CCDC174Q6PII3 467 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 CCDC170Q8IYT3 715 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
TNFSF13B-202ENST00000430559 KRT18P05783 430 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 PSMD2Q13200 908 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 EZH2Q15910 746 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 ASTE1Q2TB18 679 aaPredicted RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 KSR1Q8IVT5 923 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 GMCL1P1Q8NEA9 526 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 GMCL1Q96IK5 515 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 NT5C3AQ9H0P0 336 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 KDM3AQ9Y4C1 1321 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 MAP2K7O14733 419 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 CHMP2AO43633 222 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 BUB1O43683 1085 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 MYBL2P10244 700 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 SREBF1P36956 1147 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 C2orf54Q08AI8 447 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 DGKZQ13574 1117 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 STYK1Q6J9G0 422 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 TRIM59Q8IWR1 403 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 TSG101Q99816 390 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
TNFSF13B-202ENST00000430559 SHTN1A0MZ66 631 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 AKR1B10O60218 316 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 CFBP00751 764 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 CDK17Q00537 523 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 RASSF7Q02833 373 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 SH2D4AQ9H788 454 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 JADE2Q9NQC1 790 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 IGLV3-22A0A075B6J6 115 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 CASP4P49662 377 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 KIF5AQ12840 1032 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 ADAM9Q13443 819 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 BRD3Q15059 726 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 CACNA2D4Q7Z3S7 1137 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 AJAP1Q9UKB5 411 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-202ENST00000430559 NR2F2P24468 414 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 AP3B2Q13367 1082 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 Q4G0T1 1027 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 TDRD12Q587J7 1177 aaKnown RBP13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 DEF6Q9H4E7 631 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 CNTNAP1P78357 1384 aa13.77□□□□□ -0.2
TNFSF13B-202ENST00000430559 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 CLIC2O15247 247 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 SLC9A1P19634 815 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 RPA1P27694 616 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 MMP14P50281 582 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 DNA2P51530 1060 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 EN1Q05925 392 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 SPA17Q15506 151 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 DPY19L2P1Q6NXN4 242 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 EIF2AK1Q9BQI3 630 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 RBBP6Q7Z6E9 1792 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 IPO7O95373 1038 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 SLFN12Q8IYM2 578 aa13.77□□□□□ -0.21
TNFSF13B-202ENST00000430559 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms